Variant report

Variant	rs1543507
Chromosome Location	chr9:101688190-101688191
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:101684205..101687692-chr9:101687804..101690094,3	K562	blood:
2	chr9:101684285..101688409-chr9:101690052..101692332,4	K562	blood:
3	chr9:101687741..101689840-chr9:101692973..101695038,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs755190	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs911931	0.82[CHB][hapmap];0.85[JPT][hapmap];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv614953	chr9:101671634-101715598	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101684200-101688400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr9:101684800-101688400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr9:101686400-101691800	Weak transcription	Fetal Heart	heart
4	chr9:101686600-101688400	Enhancers	Placenta	Placenta
5	chr9:101686600-101688400	Enhancers	Left Ventricle	heart
6	chr9:101687000-101688600	Enhancers	Hela-S3	cervix
7	chr9:101687000-101691800	Weak transcription	Pancreas	Pancrea
8	chr9:101687200-101688400	Enhancers	Ovary	ovary
9	chr9:101687400-101688200	Enhancers	Right Ventricle	heart
10	chr9:101687400-101688600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr9:101687400-101688600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr9:101687600-101689800	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr9:101687600-101689800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:101687800-101688400	Enhancers	NHLF	lung
15	chr9:101687800-101690000	Weak transcription	NH-A	brain
16	chr9:101688000-101688200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr9:101688000-101689800	Weak transcription	K562	blood
18	chr9:101688000-101690000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr9:101688000-101690000	Weak transcription	Fetal Muscle Leg	muscle
20	chr9:101688000-101691600	Weak transcription	HSMM	muscle
21	chr9:101688000-101692000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr9:101688000-101697000	Weak transcription	HSMMtube	muscle
23	chr9:101688000-101701600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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