Variant report

Variant	rs755190
Chromosome Location	chr9:101700408-101700409
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1543507	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs911931	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv614953	chr9:101671634-101715598	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101688000-101701600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:101693200-101701600	Weak transcription	Ovary	ovary
3	chr9:101697800-101700800	Weak transcription	Adipose Nuclei	Adipose
4	chr9:101698000-101701000	Weak transcription	Fetal Stomach	stomach
5	chr9:101698000-101701200	Enhancers	K562	blood
6	chr9:101698800-101701000	Weak transcription	Placenta	Placenta
7	chr9:101699000-101701800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr9:101699600-101701000	Weak transcription	Fetal Muscle Leg	muscle
9	chr9:101699600-101701600	Weak transcription	Fetal Muscle Trunk	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links