Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs13013451	0.97[ASN][1000 genomes]
rs13016677	1.00[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.89[ASN][1000 genomes]
rs1386294	0.99[ASN][1000 genomes]
rs156726	0.88[EUR][1000 genomes]
rs156728	0.88[EUR][1000 genomes]
rs175775	0.85[EUR][1000 genomes]
rs1968397	0.89[ASN][1000 genomes]
rs2292521	0.92[ASN][1000 genomes]
rs275419	0.87[EUR][1000 genomes]
rs276828	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs276830	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs276835	0.81[EUR][1000 genomes]
rs276836	0.82[EUR][1000 genomes]
rs3982225	0.88[ASN][1000 genomes]
rs400960	0.88[EUR][1000 genomes]
rs460116	0.80[EUR][1000 genomes]
rs465316	0.88[EUR][1000 genomes]
rs4848360	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62171660	0.90[ASN][1000 genomes]
rs72837220	0.90[ASN][1000 genomes]
rs7561433	0.88[ASN][1000 genomes]
rs7581421	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv829624	chr2:114791945-115119926	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3401139	chr2:114793129-114817730	Flanking Active TSS Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
4	esv3381703	chr2:114794745-114989429	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114790800-114798400	Weak transcription	Fetal Brain Male	brain
2	chr2:114797200-114799400	Enhancers	Fetal Brain Female	brain

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