Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs13013451	0.92[ASN][1000 genomes]
rs13016677	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1386294	0.90[ASN][1000 genomes]
rs1564856	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs156726	0.87[EUR][1000 genomes]
rs156728	0.87[EUR][1000 genomes]
rs175775	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1968397	0.80[ASN][1000 genomes]
rs2292521	0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs275419	0.86[EUR][1000 genomes]
rs276828	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs276830	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs276831	0.84[EUR][1000 genomes]
rs276832	0.90[EUR][1000 genomes]
rs276835	0.91[EUR][1000 genomes]
rs276836	0.93[EUR][1000 genomes]
rs3982224	0.80[EUR][1000 genomes]
rs3982225	0.97[ASN][1000 genomes]
rs400960	0.87[EUR][1000 genomes]
rs460116	0.80[EUR][1000 genomes]
rs465316	0.87[EUR][1000 genomes]
rs4848360	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62171660	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs72837220	0.99[ASN][1000 genomes]
rs7561433	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114764800-114778200	Weak transcription	Pancreas	Pancrea
2	chr2:114768000-114779600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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