Variant report

Variant rs1570415
Chromosome Location chr13:40090997-40090998
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40074200-40094400 Weak transcription Adipose Nuclei Adipose
2 chr13:40076400-40096000 Weak transcription Lung lung
3 chr13:40077600-40101400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr13:40081600-40096000 Weak transcription Fetal Lung lung
5 chr13:40081600-40096600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr13:40088200-40091600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr13:40088400-40091000 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr13:40088400-40091000 Enhancers Fetal Muscle Leg muscle
9 chr13:40088400-40091000 Enhancers Right Atrium heart
10 chr13:40088400-40091600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:40088600-40091000 Enhancers Skeletal Muscle Female skeletal muscle
12 chr13:40089400-40091200 Enhancers Cortex derived primary cultured neurospheres brain
13 chr13:40089600-40091000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr13:40089600-40091000 Enhancers Colon Smooth Muscle Colon
15 chr13:40089600-40091000 Enhancers Fetal Brain Male brain
16 chr13:40089600-40091200 Enhancers Brain Hippocampus Middle brain
17 chr13:40089800-40091200 Enhancers Muscle Satellite Cultured Cells --
18 chr13:40090000-40091000 Enhancers HMEC breast
19 chr13:40090000-40091200 Flanking Active TSS Fetal Heart heart
20 chr13:40090000-40091200 Enhancers NHDF-Ad bronchial
21 chr13:40090200-40091000 Enhancers Brain Anterior Caudate brain
22 chr13:40090200-40091000 Enhancers Skeletal Muscle Male skeletal muscle
23 chr13:40090200-40091000 Enhancers HSMM muscle
24 chr13:40090200-40091200 Enhancers Brain Cingulate Gyrus brain
25 chr13:40090400-40091000 Enhancers Brain Inferior Temporal Lobe brain
26 chr13:40090400-40091000 Enhancers Psoas Muscle Psoas
27 chr13:40090600-40091000 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr13:40090600-40092200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr13:40090600-40094600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:40090600-40100800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr13:40090600-40102400 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr13:40090800-40091600 Enhancers Brain Germinal Matrix brain
33 chr13:40090800-40094000 Weak transcription Left Ventricle heart
34 chr13:40090800-40094200 Weak transcription Aorta Aorta
35 chr13:40090800-40094200 Weak transcription Right Ventricle heart
36 chr13:40090800-40094400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr13:40090800-40094600 Weak transcription Ovary ovary
38 chr13:40090800-40095800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr13:40090800-40095800 Weak transcription Brain Substantia Nigra brain
40 chr13:40090800-40095800 Weak transcription NHEK skin
41 chr13:40090800-40096000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr13:40090800-40102400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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