Variant report

Variant	rs1574237
Chromosome Location	chr10:23113061-23113062
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23108350..23110546-chr10:23110740..23113681,3	K562	blood:
2	chr10:23108350..23110476-chr10:23111720..23113681,2	K562	blood:
3	chr10:23112958..23115115-chr10:23343406..23346225,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16916144	1.00[AMR][1000 genomes]
rs16922799	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894960	chr10:23049139-23113841	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv894961	chr10:23049139-23128475	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv894962	chr10:23050683-23113841	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv894963	chr10:23050683-23121820	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv894964	chr10:23050683-23128475	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv894965	chr10:23071128-23113841	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	nsv894966	chr10:23090535-23202522	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23100200-23114400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:23106000-23113200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:23106400-23113200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr10:23109800-23115200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr10:23110000-23114800	Enhancers	HUVEC	blood vessel
6	chr10:23110200-23113800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr10:23110200-23114200	Enhancers	NHDF-Ad	bronchial
8	chr10:23110200-23114600	Enhancers	NH-A	brain
9	chr10:23110800-23113400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr10:23110800-23114000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr10:23111400-23114200	Enhancers	NHLF	lung
12	chr10:23111600-23113200	Enhancers	NHEK	skin
13	chr10:23111600-23113800	Enhancers	Osteobl	bone
14	chr10:23111800-23114400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:23111800-23114400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr10:23111800-23114600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr10:23111800-23114800	Enhancers	HepG2	liver
18	chr10:23111800-23114800	Enhancers	HSMM	muscle
19	chr10:23111800-23115200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:23111800-23115400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr10:23111800-23115400	Enhancers	HMEC	breast
22	chr10:23112000-23115200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr10:23112400-23120600	Weak transcription	HSMMtube	muscle
24	chr10:23112600-23115200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr10:23112800-23113800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr10:23112800-23113800	Weak transcription	A549	lung
27	chr10:23112800-23113800	Weak transcription	Hela-S3	cervix
28	chr10:23112800-23114400	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr10:23112800-23115200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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