Variant report

Variant	rs157874
Chromosome Location	chr1:165392814-165392815
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs157866	0.91[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs157867	0.91[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs157869	0.89[EUR][1000 genomes]
rs157870	0.89[EUR][1000 genomes]
rs157872	0.89[EUR][1000 genomes]
rs283691	0.89[EUR][1000 genomes]

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165376400-165393400	Weak transcription	Brain Hippocampus Middle	brain
2	chr1:165378000-165399600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr1:165379400-165393800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr1:165380400-165394000	Weak transcription	Right Ventricle	heart
5	chr1:165385600-165393600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr1:165389200-165393600	Weak transcription	Right Atrium	heart
7	chr1:165389200-165393800	Weak transcription	Left Ventricle	heart
8	chr1:165389400-165394000	Weak transcription	Fetal Intestine Small	intestine
9	chr1:165390000-165393200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:165390200-165393600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr1:165390800-165393200	Enhancers	Psoas Muscle	Psoas
12	chr1:165391200-165393800	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr1:165391400-165393800	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr1:165392000-165393400	Enhancers	Adipose Nuclei	Adipose
15	chr1:165392000-165393400	Enhancers	Fetal Lung	lung
16	chr1:165392200-165393400	Enhancers	Primary T helper naive cells from peripheral blood	blood
17	chr1:165392200-165393400	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr1:165392200-165393600	Enhancers	Primary T cells fromperipheralblood	blood
19	chr1:165392200-165393600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
20	chr1:165392200-165393600	Enhancers	Brain Anterior Caudate	brain
21	chr1:165392200-165393600	Enhancers	Ovary	ovary
22	chr1:165392400-165393400	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr1:165392400-165393400	Weak transcription	Stomach Smooth Muscle	stomach
24	chr1:165392400-165393600	Enhancers	Fetal Muscle Leg	muscle
25	chr1:165392600-165393000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr1:165392600-165393400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr1:165392600-165393400	Weak transcription	Brain Cingulate Gyrus	brain
28	chr1:165392600-165393600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr1:165392600-165393800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
30	chr1:165392600-165394600	Enhancers	Placenta	Placenta
31	chr1:165392800-165393000	Enhancers	Spleen	Spleen
32	chr1:165392800-165393200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr1:165392800-165393200	Enhancers	Monocytes-CD14+_RO01746	blood
34	chr1:165392800-165393400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
35	chr1:165392800-165393400	Weak transcription	Brain Substantia Nigra	brain
36	chr1:165392800-165393800	Weak transcription	Colonic Mucosa	Colon
37	chr1:165392800-165393800	Weak transcription	Esophagus	oesophagus
38	chr1:165392800-165393800	Weak transcription	Fetal Muscle Trunk	muscle
39	chr1:165392800-165393800	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr1:165392800-165394000	Weak transcription	Lung	lung

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