Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11714833	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs13069522	0.82[EUR][1000 genomes]
rs16851121	0.84[ASN][1000 genomes]
rs16851123	0.84[ASN][1000 genomes]
rs2048456	0.82[ASN][1000 genomes]
rs2048457	0.84[ASN][1000 genomes]
rs2219786	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34199471	0.84[ASN][1000 genomes]
rs4683574	0.85[ASN][1000 genomes]
rs4683575	0.85[ASN][1000 genomes]
rs4683576	0.85[ASN][1000 genomes]
rs4683577	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56966360	0.84[ASN][1000 genomes]
rs6774265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9289621	0.84[ASN][1000 genomes]
rs9289623	0.84[ASN][1000 genomes]
rs9289624	0.82[ASN][1000 genomes]
rs9289625	0.85[ASN][1000 genomes]
rs9289626	0.85[ASN][1000 genomes]
rs9859870	0.84[ASN][1000 genomes]
rs9864596	0.84[ASN][1000 genomes]
rs9867871	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9880393	0.84[EUR][1000 genomes]
rs9990158	0.84[ASN][1000 genomes]
rs9990285	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877550	chr3:140867094-140933231	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:140921600-140923000	Weak transcription	Placenta	Placenta
2	chr3:140921800-140922800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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