Variant report
| Variant | rs159393 |
|---|---|
| Chromosome Location | chr5:58854088-58854089 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58836600-58854400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr5:58836800-58857400 | Weak transcription | Primary B cells from cord blood | blood |
| 3 | chr5:58840200-58858800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr5:58840400-58856200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 5 | chr5:58840800-58858600 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr5:58843800-58862400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr5:58844400-58854600 | Weak transcription | Fetal Lung | lung |
| 8 | chr5:58844800-58854400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 9 | chr5:58845200-58856200 | Weak transcription | Hela-S3 | cervix |
| 10 | chr5:58845600-58858200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr5:58850200-58858200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 12 | chr5:58850400-58856400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 13 | chr5:58850400-58860800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr5:58850600-58856200 | Weak transcription | Fetal Intestine Large | intestine |
| 15 | chr5:58850800-58854800 | Genic enhancers | A549 | lung |
| 16 | chr5:58850800-58856200 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr5:58851600-58855600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 18 | chr5:58851600-58858600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr5:58851800-58854400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr5:58851800-58854800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr5:58851800-58855200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 22 | chr5:58851800-58855200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr5:58851800-58855400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr5:58851800-58856200 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr5:58851800-58856200 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr5:58851800-58857800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 27 | chr5:58851800-58858600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 28 | chr5:58851800-58859800 | Weak transcription | Psoas Muscle | Psoas |
| 29 | chr5:58852000-58855600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 30 | chr5:58852000-58855800 | Weak transcription | Brain Substantia Nigra | brain |
| 31 | chr5:58853200-58854600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 32 | chr5:58853400-58854600 | Weak transcription | Fetal Brain Male | brain |
| 33 | chr5:58853400-58858400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 34 | chr5:58853400-58858400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr5:58853800-58858200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 36 | chr5:58853800-58858400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 37 | chr5:58853800-58858600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr5:58854000-58858800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
