Variant report

Variant	rs1606129
Chromosome Location	chr14:84355288-84355289
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17646445	0.80[EUR][1000 genomes]
rs2026204	0.84[EUR][1000 genomes]
rs72699204	0.84[EUR][1000 genomes]
rs72699212	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72699215	0.80[EUR][1000 genomes]
rs72699218	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84354200-84359400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr14:84354200-84359600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr14:84354400-84362600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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