Variant report

Variant rs1628172
Chromosome Location chr1:144912153-144912154
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144852200-144913200 Weak transcription Stomach Mucosa stomach
2 chr1:144888200-144914400 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:144894800-144915400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:144898800-144923400 Strong transcription Adipose Nuclei Adipose
5 chr1:144900200-144921600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:144900600-144915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:144900600-144919600 Strong transcription Liver Liver
8 chr1:144900800-144915400 Strong transcription Skeletal Muscle Female skeletal muscle
9 chr1:144900800-144919800 Strong transcription Rectal Mucosa Donor 31 rectum
10 chr1:144900800-144920000 Strong transcription Duodenum Mucosa Duodenum
11 chr1:144900800-144923600 Strong transcription Fetal Muscle Leg muscle
12 chr1:144901000-144921800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:144901200-144920800 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr1:144901200-144923800 Strong transcription Fetal Brain Female brain
15 chr1:144901200-144924200 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr1:144901200-144925600 Strong transcription Placenta Placenta
17 chr1:144901400-144915400 Strong transcription Skeletal Muscle Male skeletal muscle
18 chr1:144901400-144923600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:144901600-144913400 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:144901600-144924000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:144901800-144923600 Strong transcription Brain Anterior Caudate brain
22 chr1:144901800-144925400 Strong transcription K562 blood
23 chr1:144902000-144923600 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr1:144902200-144923600 Strong transcription Brain Cingulate Gyrus brain
25 chr1:144902200-144924200 Strong transcription Stomach Smooth Muscle stomach
26 chr1:144902400-144914000 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr1:144902400-144918200 Strong transcription Left Ventricle heart
28 chr1:144902400-144924000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:144902600-144913800 Strong transcription iPS-18 Cell Line embryonic stem cell
30 chr1:144902600-144918000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:144902600-144919600 Strong transcription Fetal Intestine Large intestine
32 chr1:144902600-144924200 Strong transcription Fetal Muscle Trunk muscle
33 chr1:144902800-144913800 Strong transcription H1 Cell Line embryonic stem cell
34 chr1:144902800-144917800 Strong transcription Ovary ovary
35 chr1:144902800-144923600 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr1:144903400-144918200 Strong transcription Brain Inferior Temporal Lobe brain
37 chr1:144903800-144923600 Strong transcription Brain Hippocampus Middle brain
38 chr1:144905000-144921200 Strong transcription Fetal Kidney kidney
39 chr1:144905000-144923600 Strong transcription Brain Germinal Matrix brain
40 chr1:144906000-144915200 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:144906800-144917400 Strong transcription Right Ventricle heart
42 chr1:144907000-144912600 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr1:144907200-144914400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:144907600-144914400 Weak transcription Spleen Spleen
45 chr1:144907800-144912800 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr1:144908600-144917800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:144908600-144923800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:144908800-144923400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:144909200-144912400 Weak transcription Fetal Heart heart
50 chr1:144909200-144913000 Genic enhancers Primary T helper cells PMA-I stimulated --

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