Variant report

Variant rs638780
Chromosome Location chr1:144910082-144910083
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144852200-144913200 Weak transcription Stomach Mucosa stomach
2 chr1:144875000-144911000 Weak transcription Thymus Thymus
3 chr1:144883000-144911600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:144888200-144914400 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:144894000-144911600 Weak transcription Fetal Thymus thymus
6 chr1:144894800-144915400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:144898800-144923400 Strong transcription Adipose Nuclei Adipose
8 chr1:144900200-144921600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:144900600-144915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:144900600-144919600 Strong transcription Liver Liver
11 chr1:144900800-144915400 Strong transcription Skeletal Muscle Female skeletal muscle
12 chr1:144900800-144919800 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr1:144900800-144920000 Strong transcription Duodenum Mucosa Duodenum
14 chr1:144900800-144923600 Strong transcription Fetal Muscle Leg muscle
15 chr1:144901000-144921800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:144901200-144920800 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr1:144901200-144923800 Strong transcription Fetal Brain Female brain
18 chr1:144901200-144924200 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr1:144901200-144925600 Strong transcription Placenta Placenta
20 chr1:144901400-144915400 Strong transcription Skeletal Muscle Male skeletal muscle
21 chr1:144901400-144923600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:144901600-144913400 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr1:144901600-144924000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:144901800-144923600 Strong transcription Brain Anterior Caudate brain
25 chr1:144901800-144925400 Strong transcription K562 blood
26 chr1:144902000-144923600 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr1:144902200-144923600 Strong transcription Brain Cingulate Gyrus brain
28 chr1:144902200-144924200 Strong transcription Stomach Smooth Muscle stomach
29 chr1:144902400-144911600 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr1:144902400-144914000 Strong transcription iPS-20b Cell Line embryonic stem cell
31 chr1:144902400-144918200 Strong transcription Left Ventricle heart
32 chr1:144902400-144924000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:144902600-144913800 Strong transcription iPS-18 Cell Line embryonic stem cell
34 chr1:144902600-144918000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:144902600-144919600 Strong transcription Fetal Intestine Large intestine
36 chr1:144902600-144924200 Strong transcription Fetal Muscle Trunk muscle
37 chr1:144902800-144913800 Strong transcription H1 Cell Line embryonic stem cell
38 chr1:144902800-144917800 Strong transcription Ovary ovary
39 chr1:144902800-144923600 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:144903400-144910200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:144903400-144911000 Weak transcription Gastric stomach
42 chr1:144903400-144911400 Weak transcription Small Intestine intestine
43 chr1:144903400-144918200 Strong transcription Brain Inferior Temporal Lobe brain
44 chr1:144903800-144923600 Strong transcription Brain Hippocampus Middle brain
45 chr1:144905000-144921200 Strong transcription Fetal Kidney kidney
46 chr1:144905000-144923600 Strong transcription Brain Germinal Matrix brain
47 chr1:144906000-144915200 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr1:144906200-144910200 Weak transcription Colonic Mucosa Colon
49 chr1:144906400-144910600 Genic enhancers Primary B cells from peripheral blood blood
50 chr1:144906800-144910200 Genic enhancers HMEC breast

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