The 2.0 version of rSNPBase

Variant report

Variant rs1631879
Chromosome Location chr6:134559770-134559771
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134551000-134564000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:134551400-134560200 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr6:134551600-134561600 Weak transcription Primary hematopoietic stem cells blood
4 chr6:134556400-134560200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:134557200-134560200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr6:134557200-134560200 Weak transcription Fetal Muscle Leg muscle
7 chr6:134557200-134561400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr6:134557400-134560200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr6:134557400-134560200 Weak transcription Right Atrium heart
10 chr6:134557400-134561800 Enhancers Brain Hippocampus Middle brain
11 chr6:134557600-134560200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr6:134557600-134560200 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr6:134557600-134560200 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr6:134557600-134561600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:134557800-134560400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr6:134557800-134560400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:134557800-134561000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr6:134557800-134561600 Weak transcription HMEC breast
19 chr6:134557800-134562000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:134557800-134571000 Weak transcription NH-A brain
21 chr6:134558000-134560000 Weak transcription Primary T cells from cord blood blood
22 chr6:134558000-134560200 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr6:134558000-134560200 Weak transcription K562 blood
24 chr6:134558000-134561000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:134558000-134561400 Weak transcription NHEK skin
26 chr6:134558000-134561600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:134558000-134561600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:134558200-134560000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:134558200-134560200 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr6:134558200-134561600 Weak transcription GM12878-XiMat blood
31 chr6:134558400-134560200 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:134558600-134560200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr6:134558600-134560200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr6:134558800-134560200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr6:134558800-134560200 Weak transcription Pancreas Pancrea
36 chr6:134559000-134559800 Enhancers Brain Anterior Caudate brain
37 chr6:134559000-134560000 Weak transcription Primary B cells from cord blood blood
38 chr6:134559000-134561400 Enhancers Cortex derived primary cultured neurospheres brain
39 chr6:134559200-134559800 Enhancers Pancreatic Islets Pancreatic Islet
40 chr6:134559200-134560400 Enhancers Skeletal Muscle Male skeletal muscle
41 chr6:134559200-134560800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr6:134559200-134561000 Enhancers Brain Germinal Matrix brain
43 chr6:134559200-134561200 Enhancers Brain Angular Gyrus brain
44 chr6:134559200-134561200 Enhancers Brain Inferior Temporal Lobe brain
45 chr6:134559200-134561200 Enhancers Brain Substantia Nigra brain
46 chr6:134559200-134561200 Enhancers HepG2 liver
47 chr6:134559200-134562400 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr6:134559200-134563200 Enhancers Primary T helper cells PMA-I stimulated --
49 chr6:134559400-134560400 Enhancers NHDF-Ad bronchial
50 chr6:134559400-134561000 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015