The 2.0 version of rSNPBase

Variant report

Variant rs4896029
Chromosome Location chr6:134563347-134563348
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134551000-134564000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:134557800-134571000 Weak transcription NH-A brain
3 chr6:134560200-134563400 Enhancers Primary monocytes fromperipheralblood blood
4 chr6:134560200-134563400 Enhancers Primary T cells fromperipheralblood blood
5 chr6:134560200-134563400 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr6:134560200-134563400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr6:134560200-134563400 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr6:134561000-134569600 Weak transcription Ovary ovary
9 chr6:134561200-134565600 Weak transcription Pancreas Pancrea
10 chr6:134561200-134568200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:134561200-134568400 Weak transcription Brain Substantia Nigra brain
12 chr6:134561200-134568400 Weak transcription Esophagus oesophagus
13 chr6:134561800-134568200 Weak transcription Brain Hippocampus Middle brain
14 chr6:134562000-134563400 Enhancers Monocytes-CD14+_RO01746 blood
15 chr6:134562400-134563800 Enhancers Primary neutrophils fromperipheralblood blood
16 chr6:134562400-134566200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:134562400-134566600 Weak transcription GM12878-XiMat blood
18 chr6:134562400-134567800 Weak transcription HepG2 liver
19 chr6:134562600-134566200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:134562600-134566200 Weak transcription Fetal Thymus thymus
21 chr6:134562600-134566600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:134562600-134566600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr6:134562600-134567800 Weak transcription Thymus Thymus
24 chr6:134562600-134569400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr6:134562600-134570600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr6:134562600-134574600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr6:134562800-134566000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:134562800-134566200 Weak transcription Primary T cells from cord blood blood
29 chr6:134562800-134566200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr6:134562800-134566200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr6:134562800-134566200 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr6:134562800-134566200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr6:134562800-134566200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:134562800-134566200 Weak transcription HMEC breast
35 chr6:134562800-134566200 Weak transcription NHEK skin
36 chr6:134562800-134566600 Weak transcription Primary B cells from cord blood blood
37 chr6:134562800-134566600 Weak transcription Primary B cells from peripheral blood blood
38 chr6:134562800-134568600 Weak transcription Brain Anterior Caudate brain
39 chr6:134563200-134566200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr6:134563200-134566200 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr6:134563200-134566200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015