Variant report

Variant rs1650949
Chromosome Location chr19:53497365-53497366
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53494600-53498000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr19:53495200-53497400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:53495400-53497400 ZNF genes & repeats Liver Liver
4 chr19:53495400-53497400 ZNF genes & repeats Spleen Spleen
5 chr19:53495400-53497600 Active TSS NHLF lung
6 chr19:53495600-53497800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
7 chr19:53495800-53497400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr19:53495800-53497400 Active TSS Brain Cingulate Gyrus brain
9 chr19:53495800-53497400 Active TSS Brain Substantia Nigra brain
10 chr19:53495800-53497600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr19:53495800-53497600 Active TSS Brain Angular Gyrus brain
12 chr19:53495800-53497600 Active TSS Brain Anterior Caudate brain
13 chr19:53495800-53497600 Active TSS Pancreatic Islets Pancreatic Islet
14 chr19:53495800-53497600 Active TSS Rectal Smooth Muscle rectum
15 chr19:53495800-53497800 Active TSS Aorta Aorta
16 chr19:53496000-53497600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
17 chr19:53496000-53497600 Active TSS Colon Smooth Muscle Colon
18 chr19:53496000-53497600 Active TSS Fetal Intestine Large intestine
19 chr19:53496000-53497600 Active TSS Fetal Intestine Small intestine
20 chr19:53496000-53497600 Active TSS Ovary ovary
21 chr19:53496000-53497600 Active TSS Right Atrium heart
22 chr19:53496000-53497600 Active TSS HSMM muscle
23 chr19:53496000-53497600 Active TSS K562 blood
24 chr19:53496000-53497600 Active TSS NH-A brain
25 chr19:53496000-53497600 Active TSS NHDF-Ad bronchial
26 chr19:53496000-53497800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr19:53496200-53497400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr19:53496200-53497400 Active TSS Brain Inferior Temporal Lobe brain
29 chr19:53496200-53497400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
30 chr19:53496200-53497400 Active TSS Duodenum Smooth Muscle Duodenum
31 chr19:53496200-53497400 Active TSS Fetal Heart heart
32 chr19:53496200-53497600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
33 chr19:53496200-53497600 Active TSS H9 Cell Line embryonic stem cell
34 chr19:53496200-53497600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr19:53496200-53497600 Active TSS Breast Myoepithelial Primary Cells Breast
36 chr19:53496200-53497600 Flanking Active TSS Primary B cells from peripheral blood blood
37 chr19:53496200-53497600 Active TSS Colonic Mucosa Colon
38 chr19:53496200-53497600 Active TSS Fetal Kidney kidney
39 chr19:53496200-53497600 Active TSS Left Ventricle heart
40 chr19:53496200-53497600 Active TSS Pancreas Pancrea
41 chr19:53496200-53497600 Active TSS Rectal Mucosa Donor 29 rectum
42 chr19:53496200-53497600 Active TSS Rectal Mucosa Donor 31 rectum
43 chr19:53496200-53497600 Active TSS Skeletal Muscle Female skeletal muscle
44 chr19:53496200-53498000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
45 chr19:53496200-53498000 Active TSS Fetal Lung lung
46 chr19:53496200-53498000 Active TSS Psoas Muscle Psoas
47 chr19:53496200-53498000 Flanking Active TSS Dnd41 blood
48 chr19:53496400-53497400 Active TSS ES-I3 Cell Line embryonic stem cell
49 chr19:53496400-53497400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
50 chr19:53496400-53497400 Active TSS Muscle Satellite Cultured Cells --

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