Variant report

Variant rs165656
Chromosome Location chr22:19948863-19948864
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:19931400-19954200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr22:19931400-19955200 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr22:19931800-19956800 Weak transcription Small Intestine intestine
4 chr22:19935600-19950000 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr22:19939400-19950600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr22:19941400-19950200 Weak transcription Brain Angular Gyrus brain
7 chr22:19941400-19950200 Weak transcription Brain Substantia Nigra brain
8 chr22:19941600-19949800 Weak transcription Brain Cingulate Gyrus brain
9 chr22:19943400-19949600 Weak transcription Psoas Muscle Psoas
10 chr22:19943400-19949800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr22:19943400-19950200 Weak transcription Brain Hippocampus Middle brain
12 chr22:19943600-19950200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr22:19944800-19950200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr22:19945000-19958400 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr22:19945400-19950000 Weak transcription Primary T cells fromperipheralblood blood
16 chr22:19945600-19949600 Weak transcription HSMM muscle
17 chr22:19946200-19950000 Enhancers HMEC breast
18 chr22:19946400-19950200 Enhancers Stomach Mucosa stomach
19 chr22:19946400-19951800 Enhancers Placenta Amnion Placenta Amnion
20 chr22:19946400-19952400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr22:19946800-19950000 Enhancers Liver Liver
22 chr22:19946800-19951600 Weak transcription Aorta Aorta
23 chr22:19947000-19949600 Weak transcription Muscle Satellite Cultured Cells --
24 chr22:19947000-19949600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr22:19947000-19949800 Weak transcription Osteobl bone
26 chr22:19947000-19950200 Enhancers Skeletal Muscle Male skeletal muscle
27 chr22:19947000-19950600 Enhancers Skeletal Muscle Female skeletal muscle
28 chr22:19947000-19951200 Weak transcription HSMMtube muscle
29 chr22:19947000-19951400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr22:19947200-19949800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr22:19947400-19949200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr22:19947400-19949800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr22:19947400-19949800 Weak transcription Brain Anterior Caudate brain
34 chr22:19947400-19949800 Weak transcription HUVEC blood vessel
35 chr22:19947400-19949800 Weak transcription NH-A brain
36 chr22:19947400-19950200 Weak transcription H9 Cell Line embryonic stem cell
37 chr22:19947400-19950800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr22:19947400-19951000 Enhancers Pancreas Pancrea
39 chr22:19947600-19949000 Weak transcription Fetal Brain Female brain
40 chr22:19947600-19949800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr22:19947600-19949800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr22:19947600-19949800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr22:19947600-19949800 Enhancers Duodenum Mucosa Duodenum
44 chr22:19947600-19950000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr22:19947600-19950000 Weak transcription Left Ventricle heart
46 chr22:19947600-19950000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr22:19947600-19950200 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr22:19947600-19950200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr22:19947600-19950200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr22:19947600-19950200 Enhancers Breast Myoepithelial Primary Cells Breast

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