Variant report

Variant	rs1663849
Chromosome Location	chr1:145076156-145076157
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF143	chr1:145076093-145076165	K562	blood:	n/a	n/a
2	SUZ12	chr1:145074689-145077832	NT2-D1	testis:	n/a	n/a
3	YY1	chr1:145074723-145076430	SK-N-SH	brain:	n/a	n/a
4	CHD2	chr1:145074830-145076351	HepG2	liver:	n/a	chr1:145076234-145076244
5	BACH1	chr1:145074517-145076497	H1-hESC	embryonic stem cell:	n/a	n/a
6	MYC	chr1:145074656-145076724	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTBP2	chr1:145074966-145076484	H1-hESC	embryonic stem cell:	n/a	n/a
8	MAX	chr1:145074667-145076516	SK-N-SH	brain:	n/a	n/a
9	CHD1	chr1:145074461-145076913	H1-hESC	embryonic stem cell:	n/a	chr1:145076234-145076244
10	TAF1	chr1:145074899-145076211	SK-N-SH	brain:	n/a	n/a
11	RAD21	chr1:145074821-145076278	H1-hESC	embryonic stem cell:	n/a	chr1:145076001-145076013 chr1:145076003-145076013
12	GATA2	chr1:145074855-145076235	SH-SY5Y	brain:	n/a	chr1:145075572-145075581
13	REST	chr1:145074566-145076563	H1-neurons	neurons:	n/a	chr1:145075610-145075623
14	POLR2A	chr1:145074633-145076541	U87	brain:	n/a	n/a
15	YY1	chr1:145074778-145076218	SK-N-SH_RA	brain:	n/a	n/a
16	ZNF143	chr1:145074729-145076283	H1-hESC	embryonic stem cell:	n/a	chr1:145076009-145076027 chr1:145075099-145075117
17	TEAD4	chr1:145075381-145076251	H1-hESC	embryonic stem cell:	n/a	n/a
18	TAF1	chr1:145075082-145076416	SK-N-SH	brain:	n/a	n/a
19	MAX	chr1:145074865-145076308	SK-N-SH	brain:	n/a	n/a
20	POLR2A	chr1:145074494-145076547	U87	brain:	n/a	n/a
21	USF2	chr1:145075844-145076345	HepG2	liver:	n/a	chr1:145075991-145076007
22	TBP	chr1:145075205-145076183	H1-hESC	embryonic stem cell:	n/a	n/a
23	KAP1	chr1:145074558-145076941	HEK293	kidney:	n/a	n/a
24	MAX	chr1:145074853-145076273	H1-hESC	embryonic stem cell:	n/a	n/a
25	RAD21	chr1:145074867-145076194	SK-N-SH_RA	brain:	n/a	chr1:145076001-145076013 chr1:145076003-145076013
26	IKZF1	chr1:145076001-145076563	GM12878	blood:	n/a	chr1:145076417-145076425
27	CCNT2	chr1:145075293-145076186	K562	blood:	n/a	chr1:145075523-145075532
28	ZNF263	chr1:145074537-145076847	HEK293-T-REx	kidney:	n/a	chr1:145075445-145075466 chr1:145075415-145075436 chr1:145076230-145076239
29	TEAD4	chr1:145075354-145076180	H1-hESC	embryonic stem cell:	n/a	n/a
30	USF1	chr1:145074888-145076345	SK-N-SH	brain:	n/a	chr1:145075991-145076007
31	MAX	chr1:145074547-145076205	HepG2	liver:	n/a	n/a
32	ELF1	chr1:145075341-145076194	GM12878	blood:	n/a	n/a
33	TCF7L2	chr1:145075955-145076850	HepG2	liver:	n/a	n/a
34	POLR2A	chr1:145075017-145076236	H1-neurons	neurons:	n/a	n/a
35	POLR2A	chr1:145074725-145076289	SK-N-SH	brain:	n/a	n/a
36	MAX	chr1:145075067-145076176	H1-hESC	embryonic stem cell:	n/a	n/a
37	SP4	chr1:145074987-145076242	H1-hESC	embryonic stem cell:	n/a	n/a
38	POLR2A	chr1:145074835-145076326	SK-N-MC	brain:	n/a	n/a
39	REST	chr1:145074907-145076185	SK-N-SH	brain:	n/a	chr1:145075610-145075623
40	YY1	chr1:145074848-145076252	SK-N-SH_RA	brain:	n/a	n/a
41	POLR2A	chr1:145075028-145076168	H1-neurons	neurons:	n/a	n/a
42	POLR2A	chr1:145074308-145076359	U87	brain:	n/a	n/a
43	MAZ	chr1:145075819-145076217	Hela-S3	cervix:	n/a	n/a
44	MAX	chr1:145075014-145076228	H1-hESC	embryonic stem cell:	n/a	n/a
45	POLR2A	chr1:145074976-145076201	SK-N-SH	brain:	n/a	n/a
46	SIN3A	chr1:145074585-145076385	H1-hESC	embryonic stem cell:	n/a	chr1:145075610-145075623
47	RFX5	chr1:145074652-145076930	HepG2	liver:	n/a	n/a
48	GTF2F1	chr1:145075108-145076729	H1-hESC	embryonic stem cell:	n/a	n/a
49	SIN3AK20	chr1:145074821-145076318	SK-N-SH	brain:	n/a	n/a
50	MAX	chr1:145075112-145076225	ECC-1	luminal epithelium:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:145073999..145076164-chr1:145381316..145383485,2	MCF-7	breast:
2	chr1:145073942..145076773-chr1:145095058..145097883,2	K562	blood:
3	chr1:145038465..145040335-chr1:145073529..145077328,4	MCF-7	breast:
4	chr1:145076128..145077983-chr1:145088279..145090310,2	MCF-7	breast:

Variant related genes	Relation type
PDE4DIP	TF binding region
ENSG00000223380	Chromatin interaction
ENSG00000271546	Chromatin interaction
ENSG00000178104	Chromatin interaction
ENSG00000201558	Chromatin interaction
ENSG00000233396	Chromatin interaction

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12409452	0.87[CHB][hapmap];0.86[JPT][hapmap]
rs12562504	0.90[CEU][hapmap]
rs1778773	0.93[JPT][hapmap]
rs2799323	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs28549707	0.93[JPT][hapmap]
rs3845336	1.00[JPT][hapmap]
rs3906886	1.00[JPT][hapmap]
rs7355144	0.93[JPT][hapmap]
rs9424815	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:92 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1828275	chr1:144274482-145098718	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
2	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
3	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
4	nsv1005230	chr1:144865627-145151820	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
5	esv1828244	chr1:144865627-145243316	Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
6	esv2753260	chr1:144873327-145129144	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
7	nsv872214	chr1:144875799-145195645	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
8	nsv821620	chr1:144885908-145095806	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
9	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
10	esv1824264	chr1:144902232-145098718	Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
11	esv1828303	chr1:144902232-145098718	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
12	esv1831542	chr1:144902232-145098718	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
13	esv1843292	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
14	esv1850612	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
15	esv1819879	chr1:144902232-145287810	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
16	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
17	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
18	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
19	nsv870419	chr1:144912330-145113174	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
20	nsv821349	chr1:144916753-145090362	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
21	nsv824365	chr1:144916753-145090362	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
22	esv32934	chr1:144920018-145079815	Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
23	esv3387252	chr1:144922395-145093993	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	esv1820235	chr1:144923014-145087821	Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
25	esv1805522	chr1:144938320-145104261	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
26	esv1846928	chr1:144938320-145104261	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
27	esv1815206	chr1:144940095-145082961	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
28	esv1815389	chr1:144940855-145080948	Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
29	esv1846259	chr1:144941990-145083949	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
30	esv1826390	chr1:144943140-145085418	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
31	esv1815951	chr1:144948280-145078168	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
32	esv1845217	chr1:144948280-145078168	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
33	esv1826769	chr1:144948280-145088893	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
34	esv19656	chr1:144948283-145083994	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
35	nsv8069	chr1:144948383-145081051	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
36	nsv824376	chr1:144949067-145080191	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
37	nsv1004608	chr1:144949963-145113854	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
38	nsv1005041	chr1:144949963-145115473	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
39	nsv1009656	chr1:144949963-145117972	Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
40	nsv1000018	chr1:144949963-145249507	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
41	nsv1000851	chr1:144949963-145276259	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
42	nsv1012982	chr1:144949963-145290292	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
43	nsv1003688	chr1:144949963-145398179	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	257 gene(s)	inside rSNPs	diseases
44	nsv1012811	chr1:144950969-145152745	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
45	nsv819024	chr1:144954347-145080503	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
46	esv1825409	chr1:144955237-145077651	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
47	nsv432720	chr1:144956393-145727683	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
48	nsv999681	chr1:144957688-145080039	Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
49	esv2761299	chr1:144957688-145366695	Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
50	nsv824398	chr1:144959318-145079888	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145074400-145076400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:145074400-145076400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
3	chr1:145074600-145076800	Flanking Active TSS	NHDF-Ad	bronchial
4	chr1:145074800-145076200	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
5	chr1:145074800-145076200	Flanking Active TSS	Osteobl	bone
6	chr1:145074800-145076400	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
7	chr1:145074800-145076600	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
8	chr1:145074800-145076600	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
9	chr1:145074800-145076800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
11	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
12	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr1:145075000-145076200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
14	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
15	chr1:145075000-145076200	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
16	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
18	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
19	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Fetal Intestine Large	intestine
20	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
21	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
22	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
23	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
24	chr1:145075000-145076200	Flanking Active TSS	HSMM	muscle
25	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	NH-A	brain
26	chr1:145075000-145076200	Flanking Bivalent TSS/Enh	NHEK	skin
27	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
31	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
32	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
33	chr1:145075200-145076200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
34	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
37	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
39	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Esophagus	oesophagus
40	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
41	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
42	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Psoas Muscle	Psoas
43	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
44	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 31	rectum
45	chr1:145075200-145076200	Flanking Active TSS	Right Ventricle	heart
46	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Skeletal Muscle Female	skeletal muscle
47	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
48	chr1:145075200-145076200	Flanking Bivalent TSS/Enh	Spleen	Spleen
49	chr1:145075200-145076200	Bivalent/Poised TSS	A549	lung
50	chr1:145075200-145076200	Flanking Active TSS	HSMMtube	muscle

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