Variant report

Variant rs3906886
Chromosome Location chr1:145099816-145099817
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145096800-145113400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:145097000-145100000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:145097000-145100000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:145097000-145100000 Flanking Active TSS NHDF-Ad bronchial
5 chr1:145097200-145100000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:145097200-145100000 Enhancers Sigmoid Colon Sigmoid Colon
7 chr1:145097200-145100200 Weak transcription Left Ventricle heart
8 chr1:145097200-145100400 Enhancers Small Intestine intestine
9 chr1:145097200-145110600 Weak transcription Pancreas Pancrea
10 chr1:145097200-145110800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:145097400-145100000 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr1:145097400-145100800 Weak transcription Fetal Thymus thymus
13 chr1:145097400-145101400 Weak transcription Primary B cells from peripheral blood blood
14 chr1:145097400-145103400 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:145097400-145113000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:145097400-145114200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:145097600-145108600 Weak transcription Fetal Muscle Trunk muscle
18 chr1:145097800-145100000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr1:145097800-145100200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:145097800-145110800 Weak transcription Fetal Stomach stomach
21 chr1:145097800-145118000 Weak transcription Colonic Mucosa Colon
22 chr1:145097800-145130000 Weak transcription Right Ventricle heart
23 chr1:145098000-145100400 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr1:145098000-145100600 Weak transcription Fetal Heart heart
25 chr1:145098000-145111400 Weak transcription Brain Anterior Caudate brain
26 chr1:145098000-145112200 Weak transcription H1 Cell Line embryonic stem cell
27 chr1:145098200-145100000 Enhancers Primary T helper cells PMA-I stimulated --
28 chr1:145098200-145100000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:145098200-145100000 Enhancers Adipose Nuclei Adipose
30 chr1:145098200-145100000 Enhancers HSMM muscle
31 chr1:145098200-145100000 Enhancers HSMMtube muscle
32 chr1:145098200-145100200 Weak transcription Placenta Placenta
33 chr1:145098200-145100200 Active TSS GM12878-XiMat blood
34 chr1:145098200-145101200 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr1:145098200-145101400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:145098200-145103400 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:145098200-145103600 Weak transcription Fetal Kidney kidney
38 chr1:145098200-145106000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:145098200-145106000 Weak transcription Fetal Lung lung
40 chr1:145098200-145107200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:145098200-145108400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:145098200-145109400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:145098200-145109400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr1:145098200-145110000 Weak transcription Placenta Amnion Placenta Amnion
45 chr1:145098200-145110600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:145098200-145110600 Weak transcription Aorta Aorta
47 chr1:145098200-145112400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:145098200-145113800 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr1:145098200-145118000 Weak transcription Brain Angular Gyrus brain
50 chr1:145098200-145118000 Weak transcription Stomach Smooth Muscle stomach

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