Variant report
| Variant | rs1677140 |
|---|---|
| Chromosome Location | chr12:21786695-21786696 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:21773200-21786800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr12:21778800-21787000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr12:21779000-21786800 | Weak transcription | Ovary | ovary |
| 4 | chr12:21779600-21787200 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr12:21780400-21787000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr12:21780600-21786800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 7 | chr12:21781200-21787000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr12:21781200-21787200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 9 | chr12:21781200-21787200 | Weak transcription | Esophagus | oesophagus |
| 10 | chr12:21781200-21787200 | Weak transcription | Pancreas | Pancrea |
| 11 | chr12:21781200-21787200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr12:21781200-21788200 | Weak transcription | Right Ventricle | heart |
| 13 | chr12:21781200-21796400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr12:21781200-21809600 | Weak transcription | Small Intestine | intestine |
| 15 | chr12:21781600-21787200 | Weak transcription | Brain Hippocampus Middle | brain |
| 16 | chr12:21781800-21787000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr12:21781800-21787200 | Weak transcription | Spleen | Spleen |
| 18 | chr12:21782000-21787200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 19 | chr12:21782000-21790600 | Weak transcription | Fetal Heart | heart |
| 20 | chr12:21782200-21791000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr12:21782600-21787000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 22 | chr12:21782600-21787200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 23 | chr12:21782600-21805400 | Weak transcription | Colonic Mucosa | Colon |
| 24 | chr12:21783000-21787200 | Weak transcription | Brain Germinal Matrix | brain |
| 25 | chr12:21783600-21787200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 26 | chr12:21783800-21787200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 27 | chr12:21783800-21801600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 28 | chr12:21784000-21789800 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 29 | chr12:21784000-21791000 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr12:21784200-21786800 | Weak transcription | Lung | lung |
| 31 | chr12:21784200-21787200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 32 | chr12:21784200-21789000 | Strong transcription | Primary T cells from cord blood | blood |
| 33 | chr12:21784400-21786800 | Weak transcription | Adipose Nuclei | Adipose |
| 34 | chr12:21784400-21787200 | Weak transcription | HSMM | muscle |
| 35 | chr12:21784600-21786800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 36 | chr12:21784600-21786800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr12:21784600-21786800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 38 | chr12:21784600-21786800 | Weak transcription | NHEK | skin |
| 39 | chr12:21784600-21787200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr12:21784600-21792400 | Strong transcription | Fetal Thymus | thymus |
| 41 | chr12:21784800-21786800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 42 | chr12:21784800-21787200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr12:21784800-21787200 | Weak transcription | HMEC | breast |
| 44 | chr12:21784800-21787200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 45 | chr12:21784800-21787600 | Weak transcription | Hela-S3 | cervix |
| 46 | chr12:21785000-21786800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 47 | chr12:21785000-21787000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 48 | chr12:21785000-21787200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 49 | chr12:21785000-21787200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 50 | chr12:21785000-21787200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
