Variant report

Variant rs16822614
Chromosome Location chr6:32409953-32409954
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32390000-32410000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32407200-32410600 Active TSS Duodenum Smooth Muscle Duodenum
3 chr6:32407400-32410200 Active TSS Duodenum Mucosa Duodenum
4 chr6:32407400-32411000 Active TSS Rectal Mucosa Donor 29 rectum
5 chr6:32407600-32410400 Active TSS Brain Hippocampus Middle brain
6 chr6:32407800-32410000 Active TSS Thymus Thymus
7 chr6:32407800-32415000 Weak transcription Gastric stomach
8 chr6:32408000-32410400 Weak transcription Left Ventricle heart
9 chr6:32408000-32410600 Active TSS Primary Natural Killer cells fromperipheralblood blood
10 chr6:32408000-32412800 Weak transcription Right Ventricle heart
11 chr6:32408200-32410000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr6:32408200-32410000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:32408200-32410800 Weak transcription Small Intestine intestine
14 chr6:32408200-32411400 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
15 chr6:32408200-32411800 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
16 chr6:32408200-32412200 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
17 chr6:32408600-32411000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr6:32408600-32415200 Weak transcription Stomach Mucosa stomach
19 chr6:32408800-32410000 Active TSS Primary mononuclear cells fromperipheralblood Blood
20 chr6:32408800-32410400 Active TSS Adipose Nuclei Adipose
21 chr6:32408800-32410800 Weak transcription Brain Anterior Caudate brain
22 chr6:32408800-32411000 Weak transcription Lung lung
23 chr6:32408800-32411800 Weak transcription Liver Liver
24 chr6:32408800-32415600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr6:32409200-32410200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
26 chr6:32409200-32410200 Weak transcription Brain Substantia Nigra brain
27 chr6:32409200-32410200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr6:32409200-32410200 Enhancers Spleen Spleen
29 chr6:32409200-32410600 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
30 chr6:32409200-32412200 Transcr. at gene 5' and 3' GM12878-XiMat blood
31 chr6:32409200-32413000 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:32409400-32412200 Weak transcription Colonic Mucosa Colon
33 chr6:32409600-32410000 Active TSS Primary hematopoietic stem cells blood
34 chr6:32409600-32410000 Weak transcription Fetal Thymus thymus
35 chr6:32409600-32411200 Weak transcription Primary T regulatory cells fromperipheralblood blood

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