Variant report

Variant	rs16824595
Chromosome Location	chr2:184355181-184355182
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10931080	0.87[ASN][1000 genomes]
rs16824598	0.95[ASN][1000 genomes]
rs4666914	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508188	chr2:184353162-184383232	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:184351000-184360200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr2:184351800-184355200	Enhancers	Fetal Heart	heart
3	chr2:184355000-184355600	Enhancers	Fetal Intestine Small	intestine
4	chr2:184355000-184355600	Enhancers	Stomach Smooth Muscle	stomach
5	chr2:184355000-184355800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr2:184355000-184356200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr2:184355000-184356400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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