Variant report

Variant rs16825384
Chromosome Location chr1:144934562-144934563
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144932800-144934600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
2 chr1:144933000-144937600 Enhancers Primary T helper naive cells fromperipheralblood blood
3 chr1:144933000-144937600 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr1:144933000-144937600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:144933000-144937800 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr1:144933000-144937800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr1:144933200-144935600 Enhancers Primary T helper cells PMA-I stimulated --
8 chr1:144933200-144936400 Weak transcription Esophagus oesophagus
9 chr1:144933200-144936800 Weak transcription Gastric stomach
10 chr1:144933200-144937000 Enhancers Dnd41 blood
11 chr1:144933200-144937400 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr1:144933200-144937800 Enhancers Primary T cells from cord blood blood
13 chr1:144933200-144937800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr1:144933200-144938200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:144933200-144938200 Weak transcription Fetal Muscle Trunk muscle
16 chr1:144933200-144938400 Enhancers Primary T helper cells fromperipheralblood blood
17 chr1:144933200-144940800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:144933200-144941000 Weak transcription Aorta Aorta
19 chr1:144933200-144941000 Weak transcription Ovary ovary
20 chr1:144933200-144943800 Weak transcription Lung lung
21 chr1:144933400-144934600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:144933400-144934600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:144933400-144934600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:144933400-144934600 Enhancers Placenta Amnion Placenta Amnion
25 chr1:144933400-144934600 Enhancers Skeletal Muscle Male skeletal muscle
26 chr1:144933400-144934600 Enhancers Skeletal Muscle Female skeletal muscle
27 chr1:144933400-144934600 Enhancers Osteobl bone
28 chr1:144933400-144934800 Enhancers Adipose Nuclei Adipose
29 chr1:144933400-144935000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr1:144933400-144935200 Enhancers GM12878-XiMat blood
31 chr1:144933400-144935400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr1:144933400-144935400 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr1:144933400-144935400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:144933400-144935400 Weak transcription Stomach Mucosa stomach
35 chr1:144933400-144935800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:144933400-144936000 Strong transcription HSMMtube muscle
37 chr1:144933400-144936200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:144933400-144936400 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:144933400-144936400 Weak transcription Liver Liver
40 chr1:144933400-144936400 Weak transcription Colonic Mucosa Colon
41 chr1:144933400-144936400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr1:144933400-144936400 Weak transcription Fetal Lung lung
43 chr1:144933400-144936400 Weak transcription Fetal Muscle Leg muscle
44 chr1:144933400-144936400 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr1:144933400-144936400 Weak transcription Stomach Smooth Muscle stomach
46 chr1:144933400-144936400 Weak transcription Hela-S3 cervix
47 chr1:144933400-144936400 Weak transcription NHDF-Ad bronchial
48 chr1:144933400-144936600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:144933400-144936600 Weak transcription Brain Hippocampus Middle brain
50 chr1:144933400-144936600 Weak transcription Pancreatic Islets Pancreatic Islet

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