Variant report

Variant rs16827277
Chromosome Location chr1:145453364-145453365
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145442400-145455200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:145443200-145454200 Enhancers Primary T cells fromperipheralblood blood
3 chr1:145443200-145454200 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:145443200-145455000 Weak transcription Brain Germinal Matrix brain
5 chr1:145443600-145455600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:145444400-145454400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:145445800-145454200 Enhancers Primary T helper cells fromperipheralblood blood
8 chr1:145447200-145454200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:145447200-145456200 Enhancers Pancreas Pancrea
10 chr1:145448000-145454000 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr1:145448000-145454200 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr1:145448000-145455200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:145448200-145453400 Enhancers Stomach Mucosa stomach
14 chr1:145448200-145454200 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr1:145448200-145454200 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:145448200-145454400 Enhancers Primary B cells from peripheral blood blood
17 chr1:145448200-145455600 Enhancers Fetal Muscle Leg muscle
18 chr1:145448200-145457400 Enhancers Sigmoid Colon Sigmoid Colon
19 chr1:145448200-145457800 Enhancers Placenta Placenta
20 chr1:145448400-145453600 Enhancers Primary T cells from cord blood blood
21 chr1:145448400-145454400 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr1:145448400-145454400 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr1:145448600-145454200 Enhancers Rectal Mucosa Donor 31 rectum
24 chr1:145448600-145454400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:145449400-145453600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr1:145449400-145454200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:145449400-145454200 Enhancers GM12878-XiMat blood
28 chr1:145449600-145454600 Weak transcription Fetal Lung lung
29 chr1:145449600-145455000 Weak transcription A549 lung
30 chr1:145449600-145456000 Enhancers Right Ventricle heart
31 chr1:145449800-145453600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:145449800-145454000 Enhancers Hela-S3 cervix
33 chr1:145449800-145454200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:145449800-145454200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:145449800-145454200 Weak transcription Dnd41 blood
36 chr1:145449800-145455600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:145450000-145453600 Enhancers Colonic Mucosa Colon
38 chr1:145450000-145454000 Enhancers Primary neutrophils fromperipheralblood blood
39 chr1:145450000-145454000 Weak transcription Fetal Intestine Large intestine
40 chr1:145450000-145454200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:145450000-145454200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:145450000-145454200 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr1:145450000-145454200 Enhancers Duodenum Mucosa Duodenum
44 chr1:145450000-145454200 Enhancers Rectal Mucosa Donor 29 rectum
45 chr1:145450000-145454200 Weak transcription Osteobl bone
46 chr1:145450000-145454400 Enhancers Left Ventricle heart
47 chr1:145450000-145454400 Weak transcription NHLF lung
48 chr1:145450000-145454600 Enhancers K562 blood
49 chr1:145450000-145454600 Weak transcription NH-A brain
50 chr1:145450000-145455000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links