Variant report

Variant rs73006859
Chromosome Location chr1:145549793-145549794
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145548400-145550000 Active TSS Brain Anterior Caudate brain
2 chr1:145548400-145550000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr1:145548600-145549800 Active TSS Brain Cingulate Gyrus brain
4 chr1:145548600-145550200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr1:145548800-145549800 Flanking Bivalent TSS/Enh Dnd41 blood
6 chr1:145549000-145550200 Enhancers Spleen Spleen
7 chr1:145549200-145549800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:145549200-145549800 Bivalent Enhancer Fetal Brain Male brain
9 chr1:145549200-145549800 Weak transcription Gastric stomach
10 chr1:145549200-145549800 Enhancers Pancreas Pancrea
11 chr1:145549200-145550200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:145549200-145550200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:145549200-145550400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:145549400-145549800 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:145549400-145549800 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:145549400-145549800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
17 chr1:145549400-145549800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
18 chr1:145549400-145549800 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr1:145549400-145549800 Flanking Active TSS Muscle Satellite Cultured Cells --
20 chr1:145549400-145549800 Enhancers Liver Liver
21 chr1:145549400-145549800 Flanking Active TSS Brain Hippocampus Middle brain
22 chr1:145549400-145549800 Bivalent Enhancer Fetal Intestine Small intestine
23 chr1:145549400-145549800 Bivalent Enhancer Fetal Muscle Trunk muscle
24 chr1:145549400-145549800 Bivalent Enhancer Fetal Thymus thymus
25 chr1:145549400-145549800 Flanking Active TSS Placenta Amnion Placenta Amnion
26 chr1:145549400-145549800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
27 chr1:145549400-145549800 Enhancers Osteobl bone
28 chr1:145549400-145550000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:145549400-145550000 Bivalent Enhancer Primary B cells from peripheral blood blood
30 chr1:145549400-145550000 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr1:145549400-145550000 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
32 chr1:145549400-145550000 Flanking Active TSS Brain Angular Gyrus brain
33 chr1:145549400-145550000 Bivalent Enhancer Fetal Muscle Leg muscle
34 chr1:145549400-145550000 Enhancers HSMM muscle
35 chr1:145549400-145550000 Flanking Active TSS NHDF-Ad bronchial
36 chr1:145549400-145550200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:145549400-145550200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:145549400-145550200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:145549400-145550200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:145549400-145550200 Enhancers Lung lung
41 chr1:145549400-145550400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:145549600-145549800 Bivalent Enhancer Primary B cells from cord blood blood
43 chr1:145549600-145549800 Bivalent Enhancer Primary T cells from cord blood blood
44 chr1:145549600-145549800 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr1:145549600-145549800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
46 chr1:145549600-145549800 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr1:145549600-145549800 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
48 chr1:145549600-145549800 Flanking Bivalent TSS/Enh Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:145549600-145549800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
50 chr1:145549600-145549800 Bivalent Enhancer Cortex derived primary cultured neurospheres brain

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