Variant report

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs12486839	0.83[EUR][1000 genomes]
rs12487209	0.83[EUR][1000 genomes]
rs12487614	0.86[EUR][1000 genomes]
rs12488038	0.83[EUR][1000 genomes]
rs12489264	1.00[EUR][1000 genomes]
rs12492679	0.86[EUR][1000 genomes]
rs12492730	0.83[EUR][1000 genomes]
rs12496176	0.83[EUR][1000 genomes]
rs16830996	0.83[EUR][1000 genomes]
rs2115174	0.86[EUR][1000 genomes]
rs34842858	0.86[EUR][1000 genomes]
rs35321606	0.86[EUR][1000 genomes]
rs59249997	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59972445	0.83[EUR][1000 genomes]
rs6771983	0.86[EUR][1000 genomes]
rs6784758	0.86[EUR][1000 genomes]
rs7427801	0.86[EUR][1000 genomes]
rs7427807	0.86[EUR][1000 genomes]
rs7429852	0.86[EUR][1000 genomes]
rs7625648	0.86[EUR][1000 genomes]
rs9283612	0.86[EUR][1000 genomes]
rs9290052	0.86[EUR][1000 genomes]
rs9290053	0.86[EUR][1000 genomes]
rs9812698	0.83[EUR][1000 genomes]
rs9812995	0.83[EUR][1000 genomes]
rs9813028	0.83[EUR][1000 genomes]
rs9816860	1.00[EUR][1000 genomes]
rs9827531	0.86[EUR][1000 genomes]
rs9830969	0.83[EUR][1000 genomes]
rs9834418	1.00[EUR][1000 genomes]
rs9835467	0.83[EUR][1000 genomes]
rs9838248	0.86[EUR][1000 genomes]
rs9850910	0.83[EUR][1000 genomes]
rs9851355	0.83[EUR][1000 genomes]
rs9857045	0.83[EUR][1000 genomes]
rs9862350	0.83[EUR][1000 genomes]
rs9871440	1.00[EUR][1000 genomes]
rs9872678	0.83[EUR][1000 genomes]
rs9873090	0.83[EUR][1000 genomes]
rs9883287	0.83[EUR][1000 genomes]
rs9968092	0.86[EUR][1000 genomes]
rs9968093	0.86[EUR][1000 genomes]
rs9968097	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829769	chr3:159606913-159805282	Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159744000-159756200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:159747000-159756600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr3:159754400-159755800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:159755200-159755600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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