Variant report
| Variant | rs1683198 |
|---|---|
| Chromosome Location | chr12:42497124-42497125 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42471000-42504200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 2 | chr12:42471800-42524400 | Weak transcription | Esophagus | oesophagus |
| 3 | chr12:42474600-42514400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 4 | chr12:42474600-42518800 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr12:42476000-42524400 | Weak transcription | Gastric | stomach |
| 6 | chr12:42476200-42524400 | Weak transcription | Pancreas | Pancrea |
| 7 | chr12:42476600-42523800 | Weak transcription | Hela-S3 | cervix |
| 8 | chr12:42478000-42505000 | Weak transcription | Lung | lung |
| 9 | chr12:42478600-42511600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 10 | chr12:42479600-42505400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr12:42480200-42505600 | Weak transcription | Fetal Lung | lung |
| 12 | chr12:42480200-42512000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 13 | chr12:42480600-42504600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 14 | chr12:42483000-42502800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr12:42483200-42499200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr12:42483600-42511400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 17 | chr12:42484200-42504000 | Weak transcription | Placenta | Placenta |
| 18 | chr12:42484400-42524800 | Weak transcription | Right Ventricle | heart |
| 19 | chr12:42484600-42498800 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr12:42484800-42497400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 21 | chr12:42485000-42504000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 22 | chr12:42485200-42511600 | Weak transcription | NHDF-Ad | bronchial |
| 23 | chr12:42485600-42498400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 24 | chr12:42485800-42501400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 25 | chr12:42485800-42512200 | Weak transcription | Brain Angular Gyrus | brain |
| 26 | chr12:42486000-42513000 | Weak transcription | Aorta | Aorta |
| 27 | chr12:42488200-42505400 | Weak transcription | Fetal Muscle Leg | muscle |
| 28 | chr12:42488400-42504400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr12:42488400-42504400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr12:42488400-42504800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 31 | chr12:42488400-42504800 | Weak transcription | Fetal Intestine Small | intestine |
| 32 | chr12:42488400-42505000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr12:42488400-42512000 | Weak transcription | Osteobl | bone |
| 34 | chr12:42488600-42505000 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr12:42488600-42518600 | Weak transcription | Fetal Brain Male | brain |
| 36 | chr12:42488800-42511800 | Weak transcription | HepG2 | liver |
| 37 | chr12:42490800-42506600 | Weak transcription | NH-A | brain |
| 38 | chr12:42490800-42511200 | Weak transcription | HSMM | muscle |
| 39 | chr12:42491200-42499200 | Weak transcription | Liver | Liver |
| 40 | chr12:42491400-42497200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 41 | chr12:42491400-42498200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr12:42491400-42504800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 43 | chr12:42491400-42511200 | Weak transcription | A549 | lung |
| 44 | chr12:42491800-42499800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr12:42492000-42498400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr12:42492000-42504400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr12:42492200-42501200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 48 | chr12:42492200-42501600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 49 | chr12:42492200-42505000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr12:42492200-42505000 | Weak transcription | Ovary | ovary |
