Variant report

Variant rs16843915
Chromosome Location chr1:172118702-172118703
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172114400-172137000 Weak transcription Brain Angular Gyrus brain
2 chr1:172114800-172123600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr1:172115000-172119600 Weak transcription Ovary ovary
4 chr1:172115000-172119800 Weak transcription Fetal Muscle Leg muscle
5 chr1:172115000-172123400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:172115000-172123600 Weak transcription Adipose Nuclei Adipose
7 chr1:172115000-172133800 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:172115200-172118800 Enhancers NHDF-Ad bronchial
9 chr1:172115200-172119200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:172115200-172119400 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:172115400-172119200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:172115600-172132600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:172116000-172123400 Weak transcription NH-A brain
14 chr1:172116400-172123200 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:172116800-172123400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:172117200-172119200 Enhancers Fetal Kidney kidney
17 chr1:172117600-172119000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:172117600-172119400 Enhancers Fetal Lung lung
19 chr1:172117600-172120000 Enhancers Fetal Stomach stomach
20 chr1:172117800-172118800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:172117800-172119200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:172117800-172122200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:172118000-172118800 Enhancers Colon Smooth Muscle Colon
24 chr1:172118000-172119000 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr1:172118000-172119200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:172118000-172119600 Weak transcription Rectal Smooth Muscle rectum
27 chr1:172118000-172122200 Weak transcription HMEC breast
28 chr1:172118200-172122400 Weak transcription NHLF lung
29 chr1:172118200-172123200 Weak transcription HUVEC blood vessel
30 chr1:172118400-172119200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:172118600-172118800 Enhancers NHEK skin
32 chr1:172118600-172119000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:172118600-172119000 Enhancers Placenta Amnion Placenta Amnion
34 chr1:172118600-172119000 Enhancers Osteobl bone

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