Variant report

Variant rs16852263
Chromosome Location chr3:142029919-142029920
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:142015600-142030400 Weak transcription Primary T cells from cord blood blood
2 chr3:142017200-142030400 Weak transcription Aorta Aorta
3 chr3:142017400-142033800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:142017800-142031400 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr3:142020200-142030400 Weak transcription Thymus Thymus
6 chr3:142022000-142051400 Weak transcription Fetal Heart heart
7 chr3:142022200-142030400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr3:142023000-142030400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr3:142023000-142030600 Weak transcription Colonic Mucosa Colon
10 chr3:142023200-142030400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr3:142023200-142031600 Weak transcription Fetal Lung lung
12 chr3:142023200-142032000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr3:142023600-142030400 Weak transcription Brain Hippocampus Middle brain
14 chr3:142024000-142031800 Weak transcription GM12878-XiMat blood
15 chr3:142024000-142034200 Strong transcription Liver Liver
16 chr3:142024000-142057000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr3:142024200-142030400 Weak transcription Brain Angular Gyrus brain
18 chr3:142024200-142031000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr3:142024200-142038200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr3:142024600-142038200 Strong transcription Primary monocytes fromperipheralblood blood
21 chr3:142024600-142051000 Weak transcription Hela-S3 cervix
22 chr3:142025000-142035400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr3:142025000-142035800 Weak transcription Brain Substantia Nigra brain
24 chr3:142025600-142030400 Weak transcription Psoas Muscle Psoas
25 chr3:142025800-142031400 Weak transcription Fetal Muscle Leg muscle
26 chr3:142025800-142035200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr3:142025800-142038200 Strong transcription Primary B cells from peripheral blood blood
28 chr3:142026000-142038000 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr3:142026200-142030400 Weak transcription Small Intestine intestine
30 chr3:142026200-142031800 Weak transcription NH-A brain
31 chr3:142026200-142039400 Strong transcription Fetal Thymus thymus
32 chr3:142026400-142030400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:142026400-142030400 Weak transcription Gastric stomach
34 chr3:142026400-142030400 Weak transcription HSMMtube muscle
35 chr3:142026400-142033200 Weak transcription Esophagus oesophagus
36 chr3:142026600-142047600 Weak transcription H9 Cell Line embryonic stem cell
37 chr3:142026600-142056800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr3:142026800-142035600 Weak transcription Colon Smooth Muscle Colon
39 chr3:142026800-142047800 Weak transcription Right Ventricle heart
40 chr3:142026800-142050200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr3:142026800-142057600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:142026800-142057800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr3:142027000-142030000 Weak transcription Brain Anterior Caudate brain
44 chr3:142027000-142030400 Weak transcription Fetal Brain Female brain
45 chr3:142027000-142030400 Weak transcription Ovary ovary
46 chr3:142027000-142032000 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr3:142027000-142033800 Weak transcription Spleen Spleen
48 chr3:142027000-142042600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr3:142027200-142032800 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr3:142027200-142050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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