Variant report

Variant rs16852278
Chromosome Location chr3:142048515-142048516
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:142022000-142051400 Weak transcription Fetal Heart heart
2 chr3:142024000-142057000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:142024600-142051000 Weak transcription Hela-S3 cervix
4 chr3:142026600-142056800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:142026800-142050200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:142026800-142057600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr3:142026800-142057800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr3:142027200-142050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:142028600-142051200 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr3:142028800-142056800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr3:142029000-142050600 Weak transcription HUVEC blood vessel
12 chr3:142030200-142061400 Weak transcription Fetal Brain Male brain
13 chr3:142030600-142091400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:142030800-142050600 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr3:142030800-142050600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr3:142030800-142067800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr3:142030800-142073200 Weak transcription Stomach Mucosa stomach
18 chr3:142031000-142049800 Weak transcription HMEC breast
19 chr3:142031000-142050000 Weak transcription Brain Anterior Caudate brain
20 chr3:142031000-142050200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr3:142031000-142050600 Weak transcription Small Intestine intestine
22 chr3:142031000-142051200 Weak transcription Brain Hippocampus Middle brain
23 chr3:142031000-142057000 Weak transcription Brain Angular Gyrus brain
24 chr3:142031200-142056800 Weak transcription Gastric stomach
25 chr3:142034200-142050600 Weak transcription Spleen Spleen
26 chr3:142034200-142051200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:142034200-142057400 Weak transcription Esophagus oesophagus
28 chr3:142035400-142050400 Weak transcription HepG2 liver
29 chr3:142036000-142050600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr3:142036800-142050000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr3:142036800-142050000 Weak transcription Rectal Smooth Muscle rectum
32 chr3:142037400-142051400 Weak transcription Brain Substantia Nigra brain
33 chr3:142037600-142049600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr3:142037600-142050400 Weak transcription Thymus Thymus
35 chr3:142038600-142050600 Weak transcription H1 Cell Line embryonic stem cell
36 chr3:142038600-142051000 Weak transcription NH-A brain
37 chr3:142038600-142051400 Weak transcription HSMMtube muscle
38 chr3:142038600-142056800 Weak transcription NHEK skin
39 chr3:142038600-142073600 Weak transcription NHLF lung
40 chr3:142039200-142050000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr3:142039200-142050600 Weak transcription K562 blood
42 chr3:142039400-142051400 Weak transcription A549 lung
43 chr3:142040000-142048600 Weak transcription Muscle Satellite Cultured Cells --
44 chr3:142043400-142058600 Strong transcription Liver Liver
45 chr3:142043800-142048800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:142043800-142052800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr3:142043800-142054400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:142044000-142051600 Weak transcription Fetal Brain Female brain
49 chr3:142044200-142050000 Weak transcription GM12878-XiMat blood
50 chr3:142044400-142053000 Strong transcription Primary hematopoietic stem cells blood

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