Variant report

Variant rs16854952
Chromosome Location chr1:179888844-179888845
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179853000-179890400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:179853200-179890800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:179860200-179890200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:179867400-179897200 Weak transcription Stomach Mucosa stomach
5 chr1:179868200-179891600 Strong transcription Primary B cells from peripheral blood blood
6 chr1:179868200-179891800 Strong transcription Primary T cells fromperipheralblood blood
7 chr1:179868400-179890600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:179868400-179890800 Strong transcription Dnd41 blood
9 chr1:179868600-179891600 Strong transcription Primary monocytes fromperipheralblood blood
10 chr1:179868600-179892000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:179868800-179889000 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr1:179868800-179889200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:179868800-179889600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:179869200-179891600 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr1:179869400-179889600 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr1:179869400-179891400 Strong transcription Liver Liver
17 chr1:179870000-179890400 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:179871200-179891000 Strong transcription Duodenum Smooth Muscle Duodenum
19 chr1:179873400-179891400 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:179875200-179891800 Strong transcription Primary B cells from cord blood blood
21 chr1:179876000-179891200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:179877000-179891600 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr1:179877200-179889200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:179879600-179890800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:179880800-179891000 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr1:179881000-179891400 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:179881200-179889400 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr1:179881400-179889600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:179881400-179889600 Strong transcription NHDF-Ad bronchial
30 chr1:179881600-179889000 Strong transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:179881600-179889200 Strong transcription Hela-S3 cervix
32 chr1:179881600-179889800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr1:179881800-179889000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:179881800-179889000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:179881800-179891200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:179882000-179889400 Strong transcription Fetal Thymus thymus
37 chr1:179882000-179891600 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:179882400-179889000 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:179882400-179889000 Strong transcription Osteobl bone
40 chr1:179882400-179889400 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr1:179882600-179889800 Strong transcription Fetal Muscle Trunk muscle
42 chr1:179882600-179890800 Strong transcription Colon Smooth Muscle Colon
43 chr1:179882800-179889000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:179884600-179890400 Strong transcription Fetal Stomach stomach
45 chr1:179885000-179889000 Strong transcription HSMM muscle
46 chr1:179885600-179889400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:179886200-179889800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:179886400-179889000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr1:179886400-179889000 Strong transcription Placenta Amnion Placenta Amnion
50 chr1:179886400-179889200 Strong transcription Muscle Satellite Cultured Cells --

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