Variant report

Variant rs16856064
Chromosome Location chr1:180485061-180485062
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180472800-180488800 Weak transcription Right Atrium heart
2 chr1:180481600-180485200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:180481800-180491200 Weak transcription H1 Cell Line embryonic stem cell
4 chr1:180482000-180485200 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:180482000-180485400 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr1:180482600-180485200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:180483400-180485400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:180484400-180485600 Enhancers K562 blood
9 chr1:180484600-180485400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:180484600-180485800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:180484800-180485200 Active TSS Hela-S3 cervix
12 chr1:180484800-180485400 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr1:180484800-180485400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:180484800-180485600 Enhancers HUES6 Cell Line embryonic stem cell
15 chr1:180484800-180485600 Enhancers Brain Anterior Caudate brain
16 chr1:180484800-180485600 Enhancers HepG2 liver
17 chr1:180484800-180485800 Enhancers Dnd41 blood
18 chr1:180484800-180486000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:180484800-180486000 Enhancers Muscle Satellite Cultured Cells --
20 chr1:180484800-180486000 Enhancers Fetal Stomach stomach
21 chr1:180484800-180486200 Enhancers A549 lung
22 chr1:180484800-180486400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:180484800-180486400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:180484800-180486400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:180484800-180486400 Enhancers HMEC breast
26 chr1:180484800-180486400 Enhancers NHLF lung
27 chr1:180485000-180485200 Enhancers NHEK skin
28 chr1:180485000-180485400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:180485000-180485400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:180485000-180485600 Enhancers Brain Hippocampus Middle brain

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