The 2.0 version of rSNPBase

Variant report

Variant rs16865924
Chromosome Location chr2:7237504-7237505
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7226400-7237600 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr2:7232000-7237600 Weak transcription Ovary ovary
3 chr2:7233800-7237800 Weak transcription Gastric stomach
4 chr2:7234600-7237600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr2:7234800-7237600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:7234800-7237600 Weak transcription Colon Smooth Muscle Colon
7 chr2:7234800-7249800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr2:7235000-7237600 Weak transcription Primary T cells from cord blood blood
9 chr2:7235200-7237600 Weak transcription Fetal Lung lung
10 chr2:7235400-7237600 Weak transcription Duodenum Mucosa Duodenum
11 chr2:7235400-7237600 Weak transcription Fetal Intestine Large intestine
12 chr2:7235400-7237600 Weak transcription Pancreas Pancrea
13 chr2:7235600-7237600 Weak transcription Fetal Kidney kidney
14 chr2:7235800-7237800 Weak transcription Spleen Spleen
15 chr2:7236800-7237800 Enhancers NH-A brain
16 chr2:7236800-7238000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:7237200-7237600 Enhancers Primary T cells fromperipheralblood blood
18 chr2:7237200-7237600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr2:7237200-7237600 Enhancers Duodenum Smooth Muscle Duodenum
20 chr2:7237200-7237600 Enhancers A549 lung
21 chr2:7237200-7238000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:7237200-7238000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr2:7237200-7238000 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr2:7237200-7238000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
25 chr2:7237200-7238000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:7237200-7238200 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr2:7237200-7238200 Enhancers Cortex derived primary cultured neurospheres brain
28 chr2:7237200-7238200 Enhancers Fetal Brain Male brain
29 chr2:7237200-7238200 Enhancers Fetal Muscle Leg muscle
30 chr2:7237200-7238400 Bivalent Enhancer Fetal Muscle Trunk muscle
31 chr2:7237400-7237600 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr2:7237400-7237600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr2:7237400-7237600 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr2:7237400-7237600 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr2:7237400-7237600 Enhancers Primary T helper cells PMA-I stimulated --
36 chr2:7237400-7237600 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr2:7237400-7237600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:7237400-7237600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:7237400-7237600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:7237400-7237600 Enhancers Brain Germinal Matrix brain
41 chr2:7237400-7237600 Enhancers Brain Hippocampus Middle brain
42 chr2:7237400-7237600 Flanking Active TSS Brain Inferior Temporal Lobe brain
43 chr2:7237400-7237600 Enhancers Brain Substantia Nigra brain
44 chr2:7237400-7237600 Flanking Active TSS Stomach Smooth Muscle stomach
45 chr2:7237400-7237800 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr2:7237400-7237800 Active TSS Brain Angular Gyrus brain
47 chr2:7237400-7237800 Active TSS Brain Anterior Caudate brain
48 chr2:7237400-7237800 Active TSS Fetal Brain Female brain
49 chr2:7237400-7238000 Enhancers Primary T helper cells fromperipheralblood blood
50 chr2:7237400-7238000 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015