Variant report

Variant rs16869222
Chromosome Location chr5:16896273-16896274
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16893400-16896600 Enhancers Fetal Intestine Small intestine
2 chr5:16893400-16898400 Enhancers Fetal Intestine Large intestine
3 chr5:16893600-16898400 Enhancers Colonic Mucosa Colon
4 chr5:16893600-16899000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr5:16893800-16897000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:16893800-16897800 Enhancers HMEC breast
7 chr5:16893800-16898200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:16893800-16898200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:16893800-16898200 Enhancers Pancreas Pancrea
10 chr5:16893800-16898600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr5:16894000-16896400 Enhancers Muscle Satellite Cultured Cells --
12 chr5:16894000-16897000 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr5:16894000-16897000 Enhancers Fetal Muscle Trunk muscle
14 chr5:16894000-16897200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr5:16894000-16898200 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr5:16894000-16898200 Enhancers Sigmoid Colon Sigmoid Colon
17 chr5:16894000-16898400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr5:16894000-16898400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr5:16894000-16898400 Enhancers HUVEC blood vessel
20 chr5:16894000-16899000 Enhancers HUES6 Cell Line embryonic stem cell
21 chr5:16894200-16897200 Enhancers Adipose Nuclei Adipose
22 chr5:16894200-16898200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:16894200-16898200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr5:16894200-16898200 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr5:16894200-16898200 Enhancers Placenta Placenta
26 chr5:16894200-16898400 Enhancers H1 Cell Line embryonic stem cell
27 chr5:16894200-16898400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:16894200-16898400 Enhancers HUES48 Cell Line embryonic stem cell
29 chr5:16894200-16898400 Enhancers HUES64 Cell Line embryonic stem cell
30 chr5:16894200-16898400 Enhancers Fetal Muscle Leg muscle
31 chr5:16894200-16898800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr5:16894400-16896400 Enhancers ES-WA7 Cell Line embryonic stem cell
33 chr5:16894400-16896400 Enhancers Left Ventricle heart
34 chr5:16894400-16897000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:16894400-16898200 Enhancers Gastric stomach
36 chr5:16894400-16898400 Enhancers Fetal Lung lung
37 chr5:16894400-16900000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr5:16894600-16897000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:16894600-16898400 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr5:16894600-16898600 Enhancers NHEK skin
41 chr5:16894800-16896400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:16894800-16897000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr5:16894800-16898200 Enhancers Psoas Muscle Psoas
44 chr5:16894800-16898400 Enhancers H9 Cell Line embryonic stem cell
45 chr5:16894800-16898400 Enhancers Fetal Stomach stomach
46 chr5:16894800-16898400 Enhancers Lung lung
47 chr5:16894800-16898400 Enhancers Ovary ovary
48 chr5:16895000-16896400 Flanking Active TSS A549 lung
49 chr5:16895000-16897400 Weak transcription Fetal Kidney kidney
50 chr5:16895000-16897600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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