Variant report

Variant rs173789
Chromosome Location chr5:16895512-16895513
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16882800-16895600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:16893400-16896600 Enhancers Fetal Intestine Small intestine
3 chr5:16893400-16898400 Enhancers Fetal Intestine Large intestine
4 chr5:16893600-16898400 Enhancers Colonic Mucosa Colon
5 chr5:16893600-16899000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr5:16893800-16895600 Flanking Active TSS Hela-S3 cervix
7 chr5:16893800-16897000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:16893800-16897800 Enhancers HMEC breast
9 chr5:16893800-16898200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr5:16893800-16898200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr5:16893800-16898200 Enhancers Pancreas Pancrea
12 chr5:16893800-16898600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:16894000-16896400 Enhancers Muscle Satellite Cultured Cells --
14 chr5:16894000-16897000 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr5:16894000-16897000 Enhancers Fetal Muscle Trunk muscle
16 chr5:16894000-16897200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:16894000-16898200 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr5:16894000-16898200 Enhancers Sigmoid Colon Sigmoid Colon
19 chr5:16894000-16898400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr5:16894000-16898400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:16894000-16898400 Enhancers HUVEC blood vessel
22 chr5:16894000-16899000 Enhancers HUES6 Cell Line embryonic stem cell
23 chr5:16894200-16895600 Enhancers HSMM muscle
24 chr5:16894200-16895800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
25 chr5:16894200-16895800 Enhancers HSMMtube muscle
26 chr5:16894200-16896000 Enhancers NHDF-Ad bronchial
27 chr5:16894200-16897200 Enhancers Adipose Nuclei Adipose
28 chr5:16894200-16898200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr5:16894200-16898200 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr5:16894200-16898200 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr5:16894200-16898200 Enhancers Placenta Placenta
32 chr5:16894200-16898400 Enhancers H1 Cell Line embryonic stem cell
33 chr5:16894200-16898400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:16894200-16898400 Enhancers HUES48 Cell Line embryonic stem cell
35 chr5:16894200-16898400 Enhancers HUES64 Cell Line embryonic stem cell
36 chr5:16894200-16898400 Enhancers Fetal Muscle Leg muscle
37 chr5:16894200-16898800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr5:16894400-16895600 Weak transcription Small Intestine intestine
39 chr5:16894400-16896000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr5:16894400-16896000 Enhancers Spleen Spleen
41 chr5:16894400-16896200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:16894400-16896400 Enhancers ES-WA7 Cell Line embryonic stem cell
43 chr5:16894400-16896400 Enhancers Left Ventricle heart
44 chr5:16894400-16897000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:16894400-16898200 Enhancers Gastric stomach
46 chr5:16894400-16898400 Enhancers Fetal Lung lung
47 chr5:16894400-16900000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:16894600-16895600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr5:16894600-16895800 Enhancers Placenta Amnion Placenta Amnion
50 chr5:16894600-16896000 Enhancers Esophagus oesophagus

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