Variant report

Variant	rs16872359
Chromosome Location	chr6:44637313-44637314
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44636396..44638850-chr6:44639424..44641706,2	K562	blood:
2	chr6:44635305..44638850-chr6:44639424..44643033,3	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs632577	1.00[AMR][1000 genomes]
rs6458405	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458407	0.90[AFR][1000 genomes]
rs6458408	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6903574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6914774	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6915662	1.00[AMR][1000 genomes]
rs7758622	0.82[YRI][hapmap];0.93[AFR][1000 genomes]
rs7768424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7775278	1.00[AMR][1000 genomes]

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44627000-44637400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:44635000-44640200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr6:44635200-44638400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:44635600-44637400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr6:44635600-44638400	Weak transcription	Colon Smooth Muscle	Colon
6	chr6:44635600-44638400	Weak transcription	HMEC	breast
7	chr6:44635600-44638600	Weak transcription	NHEK	skin
8	chr6:44635600-44640000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr6:44636000-44637400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr6:44636000-44637600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr6:44636000-44642200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr6:44636200-44637400	Enhancers	Fetal Lung	lung
13	chr6:44636400-44638400	Weak transcription	Osteobl	bone
14	chr6:44636400-44638600	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr6:44636400-44638600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr6:44636400-44638600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr6:44636400-44638600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:44636400-44638600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr6:44636400-44638600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr6:44636400-44642000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr6:44636400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr6:44636400-44649200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr6:44636600-44637800	Weak transcription	HSMMtube	muscle
24	chr6:44636600-44638400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr6:44636600-44639000	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr6:44636600-44639200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr6:44636600-44647400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr6:44636800-44638600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr6:44636800-44638600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
30	chr6:44637000-44638600	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr6:44637000-44638600	Weak transcription	HSMM	muscle
32	chr6:44637000-44638800	Weak transcription	HUES64 Cell Line	embryonic stem cell
33	chr6:44637200-44637400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr6:44637200-44637800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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