Variant report

Variant	rs6914774
Chromosome Location	chr6:44638944-44638945
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44628498..44636418-chr6:44638711..44643963,7	MCF-7	breast:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16872359	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs632577	1.00[AMR][1000 genomes]
rs6458405	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458406	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458407	0.87[AFR][1000 genomes]
rs6458408	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6458409	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6903574	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6915662	1.00[AMR][1000 genomes]
rs7758622	0.87[YRI][hapmap];0.90[AFR][1000 genomes]
rs7768424	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7775278	1.00[AMR][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44635000-44640200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:44635600-44640000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:44636000-44642200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:44636400-44642000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:44636400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:44636400-44649200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr6:44636600-44639000	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr6:44636600-44639200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:44636600-44647400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:44637400-44639800	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr6:44637400-44644000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr6:44637400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr6:44637800-44639200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr6:44637800-44641000	Enhancers	HSMMtube	muscle
15	chr6:44638400-44639400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:44638400-44644800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr6:44638600-44639000	Enhancers	H9 Cell Line	embryonic stem cell
18	chr6:44638600-44639000	Enhancers	NHEK	skin
19	chr6:44638600-44639200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr6:44638600-44639400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr6:44638600-44639400	Enhancers	Placenta Amnion	Placenta Amnion
22	chr6:44638600-44641000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr6:44638600-44641200	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr6:44638600-44641200	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr6:44638600-44641800	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr6:44638600-44642000	Enhancers	HSMM	muscle
27	chr6:44638600-44645000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr6:44638800-44639000	Enhancers	H1 Cell Line	embryonic stem cell
29	chr6:44638800-44639000	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr6:44638800-44640000	Weak transcription	HMEC	breast
31	chr6:44638800-44641200	Enhancers	HUES64 Cell Line	embryonic stem cell

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