Variant report

Variant	rs16882705
Chromosome Location	chr8:34523556-34523557
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10089410	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10092484	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10108508	1.00[ASN][1000 genomes]
rs10111870	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10217066	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11994160	1.00[ASN][1000 genomes]
rs12334566	1.00[ASN][1000 genomes]
rs16882365	1.00[ASN][1000 genomes]
rs16882528	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28505609	1.00[ASN][1000 genomes]
rs6468269	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6988783	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6997049	0.84[EUR][1000 genomes]
rs7000467	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7009639	1.00[ASN][1000 genomes]
rs72629509	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72629510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640903	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640915	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640931	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640933	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640961	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640962	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72644259	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7815445	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831283	chr8:34501243-34662634	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34522600-34524600	Enhancers	HUVEC	blood vessel
2	chr8:34523000-34524400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:34523400-34524400	Weak transcription	Fetal Kidney	kidney

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