Variant report

Variant	rs10089410
Chromosome Location	chr8:34388080-34388081
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10092484	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10099704	1.00[ASN][1000 genomes]
rs10099911	1.00[ASN][1000 genomes]
rs10100213	1.00[ASN][1000 genomes]
rs10108508	1.00[ASN][1000 genomes]
rs10111870	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10217066	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11994160	1.00[ASN][1000 genomes]
rs12334566	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16882055	1.00[ASN][1000 genomes]
rs16882266	1.00[ASN][1000 genomes]
rs16882365	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs16882528	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16882705	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2719272	1.00[ASN][1000 genomes]
rs28505609	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35112066	1.00[ASN][1000 genomes]
rs6468269	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67406212	1.00[ASN][1000 genomes]
rs67908341	1.00[ASN][1000 genomes]
rs6988783	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6997049	0.86[AFR][1000 genomes]
rs7000467	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7009639	1.00[ASN][1000 genomes]
rs71513723	1.00[ASN][1000 genomes]
rs72629509	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72629510	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640903	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640931	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640933	0.89[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640961	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72640962	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72644259	0.89[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7815445	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3428603	chr8:34367445-34422532	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34388000-34388400	Enhancers	Colon Smooth Muscle	Colon

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