Variant report
| Variant | rs2719272 |
|---|---|
| Chromosome Location | chr8:34239319-34239320 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs10089410 | 1.00[ASN][1000 genomes] |
| rs10092484 | 1.00[ASN][1000 genomes] |
| rs10099704 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10099911 | 1.00[ASN][1000 genomes] |
| rs10100213 | 1.00[ASN][1000 genomes] |
| rs10108508 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs10111870 | 1.00[ASN][1000 genomes] |
| rs11994160 | 1.00[ASN][1000 genomes] |
| rs12334566 | 1.00[ASN][1000 genomes] |
| rs16882055 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs16882266 | 1.00[ASN][1000 genomes] |
| rs16882365 | 1.00[ASN][1000 genomes] |
| rs2590467 | 0.89[AFR][1000 genomes] |
| rs2590468 | 0.89[AFR][1000 genomes] |
| rs2590476 | 0.89[AFR][1000 genomes] |
| rs2590479 | 0.92[AFR][1000 genomes] |
| rs2609649 | 0.89[AFR][1000 genomes] |
| rs2609650 | 0.92[AFR][1000 genomes] |
| rs2609651 | 0.89[AFR][1000 genomes] |
| rs2719277 | 0.92[AFR][1000 genomes] |
| rs2719278 | 0.89[AFR][1000 genomes] |
| rs2719288 | 0.88[AFR][1000 genomes] |
| rs2719312 | 0.82[AFR][1000 genomes] |
| rs2719329 | 0.90[AFR][1000 genomes] |
| rs28407707 | 1.00[ASN][1000 genomes] |
| rs28505609 | 1.00[ASN][1000 genomes] |
| rs34005391 | 1.00[ASN][1000 genomes] |
| rs34564700 | 1.00[ASN][1000 genomes] |
| rs35112066 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4327859 | 0.91[AFR][1000 genomes] |
| rs67406212 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67908341 | 0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6988783 | 1.00[ASN][1000 genomes] |
| rs7000467 | 1.00[ASN][1000 genomes] |
| rs7009639 | 0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7014310 | 0.80[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs71513723 | 1.00[ASN][1000 genomes] |
| rs72640903 | 1.00[ASN][1000 genomes] |
| rs72640915 | 1.00[ASN][1000 genomes] |
| rs7815445 | 1.00[ASN][1000 genomes] |
| rs978438 | 0.89[AFR][1000 genomes] |
| rs978439 | 0.92[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:34238400-34243200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
