Variant report
| Variant | rs16882055 |
|---|---|
| Chromosome Location | chr8:34233562-34233563 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:28)
| rs_ID | r2[population] |
|---|---|
| rs10089410 | 1.00[ASN][1000 genomes] |
| rs10092484 | 1.00[ASN][1000 genomes] |
| rs10099704 | 1.00[ASN][1000 genomes] |
| rs10099911 | 1.00[ASN][1000 genomes] |
| rs10100213 | 1.00[ASN][1000 genomes] |
| rs10108508 | 1.00[ASN][1000 genomes] |
| rs10111870 | 1.00[ASN][1000 genomes] |
| rs11994160 | 1.00[ASN][1000 genomes] |
| rs12334566 | 1.00[ASN][1000 genomes] |
| rs1551654 | 0.84[YRI][hapmap] |
| rs16882266 | 1.00[ASN][1000 genomes] |
| rs16882365 | 1.00[ASN][1000 genomes] |
| rs2719272 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28407707 | 1.00[ASN][1000 genomes] |
| rs28505609 | 1.00[ASN][1000 genomes] |
| rs34005391 | 1.00[ASN][1000 genomes] |
| rs34564700 | 1.00[ASN][1000 genomes] |
| rs35112066 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67406212 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67908341 | 0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6988783 | 1.00[ASN][1000 genomes] |
| rs7000467 | 1.00[ASN][1000 genomes] |
| rs7009639 | 0.83[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7014310 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs71513723 | 1.00[ASN][1000 genomes] |
| rs72640903 | 1.00[ASN][1000 genomes] |
| rs72640915 | 1.00[ASN][1000 genomes] |
| rs7815445 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:34232600-34233600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
