Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:57105712..57108165-chr5:57110321..57113589,3	MCF-7	breast:
2	chr5:57108993..57111011-chr5:57112837..57114990,3	MCF-7	breast:
3	chr5:57112852..57115326-chr5:57117330..57119876,4	MCF-7	breast:
4	chr5:57112937..57114753-chr5:57754481..57756269,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000145632	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525330	chr5:56931673-57320343	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv2756302	chr5:56978143-57180143	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv830310	chr5:56989346-57176006	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv2763454	chr5:57006531-57161140	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57111600-57113600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr5:57111600-57113600	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr5:57111600-57113600	Enhancers	NHDF-Ad	bronchial
4	chr5:57111600-57113800	Enhancers	NHEK	skin
5	chr5:57111600-57114000	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr5:57111600-57114000	Enhancers	HMEC	breast
7	chr5:57111600-57114200	Enhancers	Muscle Satellite Cultured Cells	--
8	chr5:57111600-57114200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr5:57111600-57114200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr5:57111600-57114200	Enhancers	NH-A	brain
11	chr5:57111600-57114200	Enhancers	Osteobl	bone
12	chr5:57111600-57114400	Enhancers	HSMM	muscle
13	chr5:57111600-57114600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr5:57111800-57113800	Enhancers	A549	lung
15	chr5:57112000-57114800	Enhancers	HUVEC	blood vessel
16	chr5:57112200-57113600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr5:57112200-57114000	Enhancers	NHLF	lung
18	chr5:57112400-57114200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr5:57112800-57113600	Enhancers	Right Atrium	heart
20	chr5:57113200-57119600	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr5:57113400-57113800	Weak transcription	Fetal Lung	lung

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