The 2.0 version of rSNPBase

Variant report

Variant rs16891806
Chromosome Location chr4:15376904-15376905
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:15355800-15377400 Weak transcription Colon Smooth Muscle Colon
2 chr4:15355800-15378000 Weak transcription Rectal Smooth Muscle rectum
3 chr4:15367600-15390600 Weak transcription Spleen Spleen
4 chr4:15371000-15378000 Weak transcription NH-A brain
5 chr4:15375800-15378000 Weak transcription Placenta Amnion Placenta Amnion
6 chr4:15376000-15377000 Active TSS Fetal Lung lung
7 chr4:15376000-15377200 Active TSS Ovary ovary
8 chr4:15376000-15377400 Active TSS Psoas Muscle Psoas
9 chr4:15376200-15377000 Active TSS Fetal Muscle Leg muscle
10 chr4:15376200-15377000 Active TSS NHDF-Ad bronchial
11 chr4:15376200-15377200 Active TSS Duodenum Smooth Muscle Duodenum
12 chr4:15376200-15377400 Weak transcription Placenta Placenta
13 chr4:15376200-15377400 Active TSS NHLF lung
14 chr4:15376200-15377800 Active TSS Right Atrium heart
15 chr4:15376200-15378000 Active TSS Stomach Smooth Muscle stomach
16 chr4:15376200-15380200 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr4:15376400-15377000 Active TSS Rectal Mucosa Donor 29 rectum
18 chr4:15376400-15377000 Active TSS HSMM muscle
19 chr4:15376400-15377000 Active TSS Osteobl bone
20 chr4:15376400-15377200 Active TSS Skeletal Muscle Female skeletal muscle
21 chr4:15376600-15377000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr4:15376600-15377000 Flanking Active TSS Adipose Nuclei Adipose
23 chr4:15376600-15377400 Enhancers Monocytes-CD14+_RO01746 blood
24 chr4:15376600-15377800 Weak transcription Aorta Aorta
25 chr4:15376600-15378400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr4:15376600-15378600 Enhancers Primary T cells from cord blood blood
27 chr4:15376600-15379600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr4:15376600-15379600 Enhancers HUES6 Cell Line embryonic stem cell
29 chr4:15376600-15380600 Enhancers Primary monocytes fromperipheralblood blood
30 chr4:15376800-15377000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
31 chr4:15376800-15377000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr4:15376800-15377000 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr4:15376800-15377000 Weak transcription Fetal Intestine Small intestine
34 chr4:15376800-15377000 Weak transcription Fetal Kidney kidney
35 chr4:15376800-15377200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr4:15376800-15377200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
37 chr4:15376800-15377200 Weak transcription Fetal Stomach stomach
38 chr4:15376800-15377400 Enhancers Primary B cells from cord blood blood
39 chr4:15376800-15377600 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr4:15376800-15377800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr4:15376800-15377800 Weak transcription HSMMtube muscle
42 chr4:15376800-15378200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:15376800-15378600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr4:15376800-15378800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015