Variant report

Variant rs16893883
Chromosome Location chr5:60998770-60998771
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60994400-61002400 Weak transcription Fetal Muscle Leg muscle
2 chr5:60994800-60999400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:60994800-61002600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr5:60997000-60999000 Enhancers Brain Germinal Matrix brain
5 chr5:60997400-60998800 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr5:60997400-60998800 Enhancers Adipose Nuclei Adipose
7 chr5:60997400-60999000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr5:60997400-60999000 Enhancers Cortex derived primary cultured neurospheres brain
9 chr5:60997400-60999200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr5:60997600-60999000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:60997800-61001800 Weak transcription Brain Cingulate Gyrus brain
12 chr5:60997800-61015200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr5:60998000-60999000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:60998000-61003600 Weak transcription Brain Hippocampus Middle brain
15 chr5:60998200-61002600 Weak transcription Brain Anterior Caudate brain
16 chr5:60998400-61000000 Enhancers GM12878-XiMat blood
17 chr5:60998400-61002600 Weak transcription Brain Substantia Nigra brain
18 chr5:60998600-60998800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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