Variant report

Variant	rs16907110
Chromosome Location	chr9:93806801-93806802
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs55912824	1.00[AMR][1000 genomes]
rs57354755	1.00[AMR][1000 genomes]
rs57733345	1.00[AMR][1000 genomes]
rs61241044	1.00[AMR][1000 genomes]
rs6479327	0.85[ASW][hapmap];0.83[LWK][hapmap];0.88[MKK][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7027475	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73505587	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73505592	1.00[AMR][1000 genomes]
rs7858701	1.00[AMR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:93801000-93807000	Weak transcription	Right Atrium	heart
2	chr9:93801800-93809800	Weak transcription	A549	lung
3	chr9:93802400-93810800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr9:93803000-93807000	Weak transcription	HepG2	liver
5	chr9:93805000-93807000	Enhancers	Ovary	ovary
6	chr9:93806000-93807800	Enhancers	Colon Smooth Muscle	Colon
7	chr9:93806000-93809400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr9:93806200-93809400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr9:93806600-93807000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr9:93806600-93807200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:93806600-93808000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr9:93806800-93807800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr9:93806800-93807800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr9:93806800-93809400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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