Variant report

Variant	rs16916956
Chromosome Location	chr10:18488032-18488033
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs16916984	1.00[EUR][1000 genomes]
rs73595532	1.00[EUR][1000 genomes]
rs73595550	0.92[EUR][1000 genomes]
rs7897853	0.92[EUR][1000 genomes]
rs7901394	0.92[EUR][1000 genomes]
rs7914927	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039174	chr10:18474463-18493676	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18469400-18491200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr10:18475200-18491600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr10:18481800-18490200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:18486600-18491000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr10:18486600-18491000	Weak transcription	Fetal Heart	heart
7	chr10:18486600-18491200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr10:18486600-18491600	Weak transcription	Aorta	Aorta
9	chr10:18486600-18491800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:18486600-18492200	Weak transcription	Fetal Intestine Large	intestine
11	chr10:18486800-18491200	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr10:18486800-18491200	Weak transcription	Colon Smooth Muscle	Colon
13	chr10:18486800-18492000	Weak transcription	Left Ventricle	heart
14	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
15	chr10:18487600-18491200	Weak transcription	Stomach Smooth Muscle	stomach
16	chr10:18487800-18491000	Weak transcription	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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