Variant report

Variant rs16919694
Chromosome Location chr8:54853102-54853103
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:54845000-54857600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr8:54847800-54855600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr8:54850000-54857400 Weak transcription Brain Anterior Caudate brain
4 chr8:54850400-54856000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr8:54851000-54856000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr8:54851200-54853600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
7 chr8:54851200-54854000 ZNF genes & repeats HMEC breast
8 chr8:54851200-54872600 Weak transcription Brain Germinal Matrix brain
9 chr8:54851400-54853800 ZNF genes & repeats NHEK skin
10 chr8:54851400-54855000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr8:54851600-54854000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr8:54851600-54854400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr8:54851600-54855400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr8:54851800-54853200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr8:54851800-54853400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr8:54852000-54853400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr8:54852000-54853800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr8:54852200-54853200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr8:54852200-54853800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr8:54852200-54872600 Weak transcription Fetal Brain Female brain
21 chr8:54852400-54853200 Weak transcription Fetal Muscle Leg muscle
22 chr8:54852400-54854000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr8:54852400-54854000 Strong transcription A549 lung
24 chr8:54852400-54872600 Weak transcription Esophagus oesophagus
25 chr8:54852600-54856200 Weak transcription NHDF-Ad bronchial
26 chr8:54852800-54853400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr8:54852800-54853800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr8:54853000-54853800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr8:54853000-54853800 Strong transcription NHLF lung

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