Variant report

Variant	rs16921328
Chromosome Location	chr8:57838546-57838547
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10096356	0.83[ASN][1000 genomes]
rs11991623	0.83[ASN][1000 genomes]
rs11993931	0.87[CEU][hapmap]
rs11995615	0.83[ASN][1000 genomes]
rs17186180	0.83[ASN][1000 genomes]
rs17187027	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17790033	0.80[ASN][1000 genomes]
rs17790795	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17791051	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029443	chr8:57748114-58057656	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:57831000-57849600	Weak transcription	Pancreas	Pancrea
2	chr8:57837800-57841400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr8:57838000-57841400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:57838000-57841400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:57838000-57841400	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:57838000-57841600	Weak transcription	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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