The 2.0 version of rSNPBase

Variant report

Variant rs16921485
Chromosome Location chr8:57878437-57878438
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:57866400-57878600 Weak transcription Ovary ovary
2 chr8:57866400-57902600 Weak transcription Pancreas Pancrea
3 chr8:57866800-57880800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr8:57866800-57890000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr8:57867600-57881400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr8:57868400-57878600 Weak transcription Aorta Aorta
7 chr8:57868800-57895800 Weak transcription Spleen Spleen
8 chr8:57869000-57896000 Weak transcription Esophagus oesophagus
9 chr8:57869400-57881800 Weak transcription Stomach Mucosa stomach
10 chr8:57870400-57880600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr8:57870800-57880200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr8:57870800-57892000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr8:57871200-57888400 Weak transcription HSMMtube muscle
14 chr8:57872400-57878600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr8:57872400-57883200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr8:57872600-57880200 Strong transcription Fetal Intestine Large intestine
17 chr8:57872600-57880600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr8:57872600-57881800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr8:57872600-57882400 Strong transcription Primary T cells fromperipheralblood blood
20 chr8:57872600-57883200 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr8:57872800-57880200 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr8:57872800-57880200 Strong transcription Liver Liver
23 chr8:57872800-57880400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr8:57872800-57880600 Strong transcription Primary B cells from peripheral blood blood
25 chr8:57872800-57881600 Strong transcription Duodenum Mucosa Duodenum
26 chr8:57872800-57882600 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr8:57872800-57885400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr8:57872800-57891800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr8:57872800-57892800 Strong transcription Dnd41 blood
30 chr8:57873000-57880600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr8:57873200-57880400 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr8:57873200-57881800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr8:57873200-57882000 Strong transcription Primary monocytes fromperipheralblood blood
34 chr8:57873400-57880200 Strong transcription Rectal Mucosa Donor 31 rectum
35 chr8:57873400-57880400 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr8:57873400-57880600 Strong transcription Primary T cells from cord blood blood
37 chr8:57874200-57879000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr8:57874200-57879600 Strong transcription Primary neutrophils fromperipheralblood blood
39 chr8:57874400-57880600 Strong transcription Primary T killer naive cells fromperipheralblood blood
40 chr8:57874400-57880800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr8:57874400-57882600 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr8:57874400-57896000 Weak transcription Right Ventricle heart
43 chr8:57874600-57878800 Strong transcription Primary hematopoietic stem cells blood
44 chr8:57874600-57880600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr8:57874600-57882000 Strong transcription Fetal Thymus thymus
46 chr8:57874600-57882200 Strong transcription HSMM muscle
47 chr8:57874600-57882400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr8:57874600-57890000 Weak transcription Brain Angular Gyrus brain
49 chr8:57874800-57879800 Strong transcription Placenta Placenta
50 chr8:57874800-57880000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015