Variant report

Variant	rs16922272
Chromosome Location	chr10:22726826-22726827
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:18)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:22532777..22535733-chr10:22725259..22727750,2	MCF-7	breast:
2	chr10:22725288..22727393-chr10:22906827..22908715,2	MCF-7	breast:
3	chr10:22644273..22647184-chr10:22725817..22727697,2	MCF-7	breast:
4	chr10:22654035..22655946-chr10:22725226..22727293,2	MCF-7	breast:
5	chr10:22724628..22727475-chr10:22730880..22733467,2	K562	blood:
6	chr10:22724055..22728117-chr10:22831126..22835240,4	MCF-7	breast:
7	chr10:22661423..22663974-chr10:22725265..22727574,2	MCF-7	breast:
8	chr10:22720460..22723028-chr10:22724618..22727294,3	MCF-7	breast:
9	chr10:22517700..22519413-chr10:22725254..22727174,2	MCF-7	breast:
10	chr10:22627231..22631801-chr10:22722280..22727319,10	MCF-7	breast:
11	chr10:22604268..22606309-chr10:22726549..22728219,2	MCF-7	breast:
12	chr10:22723535..22725189-chr10:22726657..22729565,2	K562	blood:
13	chr10:22609617..22612000-chr10:22723353..22727584,5	MCF-7	breast:
14	chr10:22725325..22727863-chr10:22750975..22754414,4	MCF-7	breast:
15	chr10:22541584..22543235-chr10:22725368..22728204,2	MCF-7	breast:
16	chr10:22707988..22710566-chr10:22725566..22727431,2	MCF-7	breast:
17	chr10:22652382..22654198-chr10:22725095..22727355,2	MCF-7	breast:
18	chr10:22721937..22724239-chr10:22725208..22728501,3	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000272366	Chromatin interaction
ENSG00000148444	Chromatin interaction
ENSG00000269897	Chromatin interaction
ENSG00000168283	Chromatin interaction

rs_ID	r²[population]
rs73598519	1.00[AMR][1000 genomes]
rs7907686	0.88[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22724600-22727000	Active TSS	Osteobl	bone
2	chr10:22725200-22727000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr10:22725200-22727000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:22725200-22727000	Active TSS	Brain Substantia Nigra	brain
5	chr10:22725200-22727200	Active TSS	Brain Germinal Matrix	brain
6	chr10:22725200-22727200	Active TSS	Rectal Smooth Muscle	rectum
7	chr10:22725200-22727400	Active TSS	Brain Cingulate Gyrus	brain
8	chr10:22725200-22727400	Active TSS	HSMMtube	muscle
9	chr10:22725400-22727000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
10	chr10:22725400-22727000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr10:22725400-22727000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr10:22725400-22727000	Active TSS	Sigmoid Colon	Sigmoid Colon
13	chr10:22725400-22727200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
14	chr10:22725400-22727200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
15	chr10:22725400-22727200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr10:22725400-22727200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr10:22725400-22727200	Active TSS	Brain Angular Gyrus	brain
18	chr10:22725400-22727200	Active TSS	Fetal Brain Female	brain
19	chr10:22725400-22727200	Active TSS	Fetal Kidney	kidney
20	chr10:22725400-22727400	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr10:22725400-22727400	Flanking Active TSS	HMEC	breast
22	chr10:22725400-22727600	Active TSS	Left Ventricle	heart
23	chr10:22725400-22727600	Active TSS	Psoas Muscle	Psoas
24	chr10:22725400-22727600	Active TSS	Right Atrium	heart
25	chr10:22725400-22727800	Active TSS	Pancreatic Islets	Pancreatic Islet
26	chr10:22725600-22727000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
27	chr10:22725600-22727000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr10:22725600-22727000	Active TSS	Primary T helper naive cells from peripheral blood	blood
29	chr10:22725600-22727000	Active TSS	Primary T killer memory cells from peripheral blood	blood
30	chr10:22725600-22727000	Active TSS	Colon Smooth Muscle	Colon
31	chr10:22725600-22727000	Active TSS	Fetal Heart	heart
32	chr10:22725600-22727000	Active TSS	Fetal Intestine Small	intestine
33	chr10:22725600-22727000	Active TSS	Fetal Stomach	stomach
34	chr10:22725600-22727200	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr10:22725600-22727200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
36	chr10:22725600-22727200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr10:22725600-22727200	Active TSS	Fetal Intestine Large	intestine
38	chr10:22725600-22727200	Active TSS	Lung	lung
39	chr10:22725600-22727200	Active TSS	Right Ventricle	heart
40	chr10:22725600-22727200	Active TSS	Stomach Mucosa	stomach
41	chr10:22725600-22727400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
42	chr10:22725600-22727400	Active TSS	Aorta	Aorta
43	chr10:22725600-22727400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
44	chr10:22725600-22727400	Active TSS	Duodenum Smooth Muscle	Duodenum
45	chr10:22725600-22727400	Active TSS	Fetal Muscle Trunk	muscle
46	chr10:22725600-22727400	Active TSS	Ovary	ovary
47	chr10:22725600-22727400	Active TSS	Placenta Amnion	Placenta Amnion
48	chr10:22725600-22727400	Active TSS	Skeletal Muscle Male	skeletal muscle
49	chr10:22725600-22727400	Active TSS	HSMM	muscle
50	chr10:22725600-22727600	Active TSS	Breast Myoepithelial Primary Cells	Breast

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