Variant report

Variant	rs16923358
Chromosome Location	chr8:59234444-59234445
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs16923236	1.00[AMR][1000 genomes]
rs16923298	1.00[AMR][1000 genomes]
rs4604417	1.00[AMR][1000 genomes]
rs6997053	1.00[AMR][1000 genomes]
rs7820371	1.00[AMR][1000 genomes]
rs7830554	1.00[AMR][1000 genomes]
rs7832113	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7839207	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761427	chr8:59204373-59242564	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59229400-59241600	Weak transcription	Right Atrium	heart
2	chr8:59229800-59236400	Weak transcription	Spleen	Spleen
3	chr8:59231000-59236400	Weak transcription	Left Ventricle	heart
4	chr8:59232400-59234800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr8:59232600-59235000	Enhancers	Primary B cells from peripheral blood	blood
6	chr8:59232600-59235400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr8:59232800-59234600	Enhancers	Primary T cells fromperipheralblood	blood
8	chr8:59233600-59235200	Flanking Active TSS	GM12878-XiMat	blood
9	chr8:59233800-59234800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr8:59233800-59235000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr8:59234000-59234600	Enhancers	Primary hematopoietic stem cells	blood
12	chr8:59234000-59234800	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr8:59234000-59235000	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr8:59234000-59235000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr8:59234000-59235200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
16	chr8:59234200-59234600	Enhancers	Primary monocytes fromperipheralblood	blood
17	chr8:59234200-59234600	Enhancers	Primary B cells from cord blood	blood
18	chr8:59234200-59234600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr8:59234200-59234600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:59234200-59234600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr8:59234200-59234600	Enhancers	Fetal Lung	lung
22	chr8:59234200-59235000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
23	chr8:59234400-59234600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
24	chr8:59234400-59234800	Flanking Active TSS	Primary T cells from cord blood	blood
25	chr8:59234400-59234800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
26	chr8:59234400-59234800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
27	chr8:59234400-59235000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
28	chr8:59234400-59235000	Active TSS	Primary mononuclear cells fromperipheralblood	Blood

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